RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 POM121Q96HA1 1249 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 MED30Q96HR3 178 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 GAFA1Q96PS6 74 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 SULT4A1Q9BR01 284 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 NUDT16L1Q9BRJ7 211 aaKnown RBP6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 PECRQ9BY49 303 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 BPESC1Q9GZL8 116 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 CHST6Q9GZX3 395 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 ZNF665Q9H7R5 613 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 IFT22Q9H7X7 185 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 CHMP1AQ9HD42 196 aaPredicted RBP6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 PLEKHJ1Q9NW61 149 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 RCC2Q9P258 522 aaKnown RBP6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 DUX4Q9UBX2 424 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 LRBAP50851 2863 aa6.61□□□□□ -1.35
HMGA1P4-201ENST00000428643 IGHV4-30-2A0A087WSY4 118 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 TMEM82A0PJX8 343 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 FABP12A6NFH5 140 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 FOXI3A8MTJ6 420 aaPredicted RBP6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 MFNGO00587 321 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 SIGLEC5O15389 551 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 NDUFB3O43676 98 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 NDUFA2O43678 99 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 PSPNO60542 156 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 FSTL3O95633 263 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 GSTP1P09211 210 aaKnown RBP6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 CD3GP09693 182 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 NDUFB7P17568 137 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 NR4A2P43354 598 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 OR3A1P47881 315 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 GNG2P59768 71 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 PITPNAQ00169 270 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 RBM39Q14498 530 aaKnown RBP6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 ARL6IP1Q15041 203 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 CDNFQ49AH0 187 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 TMEM155Q4W5P6 130 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 LRRC10Q5BKY1 277 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 OLFML2AQ68BL7 652 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 LYPD2Q6UXB3 125 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 ZNF788Q6ZQV5 615 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 GDPD3Q7L5L3 318 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 CCDC190Q86UF4 302 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 LRRC75A-AS1Q8N1F1 130 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 BPIFB2Q8N4F0 458 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 ZNRF1Q8ND25 227 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 OR4S1Q8NGB4 309 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 OR8B3Q8NGG8 313 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 C15orf40Q8WUR7 153 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 NUDCD2Q8WVJ2 157 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 S100ZQ8WXG8 99 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 ST8SIA4Q92187 359 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 GCDHQ92947 438 aaPredicted RBP6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 NEIL1Q96FI4 390 aaPredicted RBP6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 CYYR1Q96J86 154 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 OR8B2Q96RD0 313 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 TSC22D3Q99576 134 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAAP24Q9BTP7 215 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 DNTTIP1Q9H147 329 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 AUNIPQ9H7T9 357 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 TMEM165Q9HC07 324 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 C12orf4Q9NQ89 552 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 ETAA1Q9NY74 926 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 HSF4Q9ULV5 492 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 V9GYH0 126 aa6.6□□□□□ -1.35
HMGA1P4-201ENST00000428643 CACNA1DQ01668 2161 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 AKAP6Q13023 2319 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 TMEM30CPA0ZSE6 113 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 SERPINE3A8MV23 424 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 K7N7A8 449 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 DVL1O14640 695 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 MGST3O14880 152 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 ZNF737O75373 536 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 TK1P04183 234 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 GLAP06280 429 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 HEXAP06865 529 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 PTHLHP12272 177 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 SLC25A16P16260 332 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 AMY2BP19961 511 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 KCNJ3P48549 501 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 EDDM3BP56851 147 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 GUCA2AQ02747 115 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 ESCO2Q56NI9 601 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 PYDC2Q56P42 97 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 ATPAF1Q5TC12 328 aaPredicted RBP6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 HACD4Q5VWC8 232 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 PYHIN1Q6K0P9 492 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 C17orf107Q6ZR85 190 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 LINC00299Q6ZSB3 139 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 TRAPPC6BQ86SZ2 158 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 OR8H2Q8N162 312 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 MFSD4AQ8N468 514 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 SETD6Q8TBK2 473 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 H1FXQ92522 213 aaKnown RBP6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 CMSS1Q9BQ75 279 aaKnown RBP6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 HDHD3Q9BSH5 251 aaPredicted RBP6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 WDR12Q9GZL7 423 aaKnown RBP6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 FAM234AQ9H0X4 552 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 SEBOXQ9HB31 216 aaPredicted RBP6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 AKIP1Q9NQ31 210 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 RABL2AQ9UBK7 228 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms