RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 TTPAP49638 278 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 AP1S1P61966 158 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 GNB2P62879 340 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 CACNG7P62955 275 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 ELF3P78545 371 aaPredicted RBP3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 BNIP2Q12982 314 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 CAPRIN1Q14444 709 aaKnown RBP3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 DMC1Q14565 340 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 TCEAL5Q5H9L2 206 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 AHSA2Q719I0 299 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 MYPOPQ86VE0 399 aaPredicted RBP3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 DEFB106AQ8N104 65 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 PACRGLQ8N7B6 248 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 ZNF738Q8NE65 137 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 C19orf18Q8NEA5 215 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 TCEAL3Q969E4 200 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 FAM104AQ969W3 186 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 ANKRD9Q96BM1 317 aaPredicted RBP3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 TBL1YQ9BQ87 522 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 ZNF251Q9BRH9 671 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 SRRQ9GZT4 340 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 DRC3Q9H069 523 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 NANOGQ9H9S0 305 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 TMEM27Q9HBJ8 222 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 HEY1Q9Y5J3 304 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 ANKRD36A6QL64 1941 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 SCN2AQ99250 2005 aa3.17□□□□□ -1.9
NUDCD1-202ENST00000427660 IGLV11-55A0A075B6I3 123 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 IGHV3-66A0A0C4DH42 116 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 FAM240AA0A1B0GVK7 77 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 NKX2-6A6NCS4 301 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 SMIM23A6NLE4 172 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 F5H5T6 163 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 PLIN3O60664 434 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 SS18L1O75177 396 aaPredicted RBP3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 NIPSNAP2O75323 286 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 SPAG7O75391 227 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 LY6G6DO95868 133 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 ZNF286BP0CG31 522 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 TCN2P20062 427 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 TEAD1P28347 426 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 GGT2P36268 569 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 SLCO1A2P46721 670 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 PSMD8P48556 350 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 CRISP3P54108 245 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 NCALDP61601 193 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 ERCC8Q13216 396 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 IRF4Q15306 451 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 GUSBP1Q15486 140 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 TOMM34Q15785 309 aaPredicted RBP3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 SSX7Q7RTT5 188 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 MRPL52Q86TS9 123 aaKnown RBP3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 SLC7A5P1Q8MH63 180 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 NATD1Q8N6N6 113 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 NECAP1Q8NC96 275 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 BLOC1S5Q8TDH9 187 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 DNAJB3Q8WWF6 145 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 TNFRSF14Q92956 283 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 EXOSC8Q96B26 276 aaKnown RBP3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 OTUB2Q96DC9 234 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 C20orf144Q9BQM9 153 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 MFSD1Q9H3U5 465 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 ZNF442Q9H7R0 627 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 GID8Q9NWU2 228 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 OR12D3Q9UGF7 316 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 VAX2Q9UIW0 290 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 RAB23Q9ULC3 237 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 WIF1Q9Y5W5 379 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 SLC5A10A0PJK1 596 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 ARL5CA6NH57 179 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 ITGB1BP1O14713 200 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 MFSD11O43934 449 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 ACTL6AO96019 429 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 GP1BAP07359 652 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 CD70P32970 193 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 OR12D2P58182 307 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 DYNLT1P63172 113 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 STX4Q12846 297 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 EIF4EBP2Q13542 120 aaPredicted RBP3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 TPBGQ13641 420 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 ZNF235Q14590 738 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 BSXQ3C1V8 233 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 RTL4Q6ZR62 310 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 PGAM4Q8N0Y7 254 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 C11orf42Q8N5U0 333 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 LINC01555Q8NAE3 123 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 GPR26Q8NDV2 337 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 ING5Q8WYH8 240 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 LZICQ8WZA0 190 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 RDH5Q92781 318 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 L3HYPDHQ96EM0 354 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 ZNF514Q96K75 400 aaPredicted RBP3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 RILPQ96NA2 401 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 HOPXQ9BPY8 73 aaPredicted RBP3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 PAIP2Q9BPZ3 127 aaKnown RBP3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 PYGO2Q9BRQ0 406 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 CHAC1Q9BUX1 264 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 EMC6Q9BV81 110 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 ULBP1Q9BZM6 244 aa3.16□□□□□ -1.9
NUDCD1-202ENST00000427660 EFCAB1Q9HAE3 211 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms