RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 RFPL4AA6NLU0 287 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 RFPL4AL1F8VTS6 287 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 F2RL2O00254 374 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 DCTN6O00399 190 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 GSTZ1O43708 216 aaPredicted RBP12.09□□□□□ -0.47
RPL28-202ENST00000426763 CT45A10P0DMU9 189 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 VSIG8P0DPA2 414 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 NANOS3P60323 173 aaKnown RBP12.09□□□□□ -0.47
RPL28-202ENST00000426763 SCGB2A2Q13296 93 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 SURF2Q15527 256 aaPredicted RBP12.09□□□□□ -0.47
RPL28-202ENST00000426763 PIGYQ3MUY2 71 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 CLEC2AQ6UVW9 174 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 LCN15Q6UWW0 184 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 LHX4Q969G2 390 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 ABHD1Q96SE0 405 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 SIP14410 1827 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 ZBTB37Q5TC79 503 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 FLVCR1-AS1Q8TAF5 88 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 ABHD17AQ96GS6 310 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 RAB40CQ96S21 281 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 NMES1Q9C002 83 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 GREB1Q4ZG55 1949 aa12.09□□□□□ -0.47
RPL28-202ENST00000426763 CTSDP07339 412 aaPredicted RBP12.08□□□□□ -0.48
RPL28-202ENST00000426763 RFPL3SP0C7P2 107 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 DHRS2Q13268 280 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 Q56UQ5 140 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 LILRB4Q8NHJ6 448 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 IGHMP01871 453 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 COX5BP10606 129 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 CD80P33681 288 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 ELOVL5Q9NYP7 299 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 A0A1W2PN81 502 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 NPIPB13A6NJU9 1138 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 NUDT19A8MXV4 375 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 TMEM229AB2RXF0 380 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 NPIPB4C9JG80 1138 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 CHRNA7P36544 502 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 HLA-DRB3P79483 266 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 ADIRFQ15847 76 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 HIST2H3PS2Q5TEC6 136 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 FAM122CQ6P4D5 195 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 TMEM91Q6ZNR0 172 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 BAP18Q8IXM2 172 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 RASL12Q9NYN1 266 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 THYN1Q9P016 225 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 SLC25A10Q9UBX3 287 aaPredicted RBP12.08□□□□□ -0.48
RPL28-202ENST00000426763 FOXD3Q9UJU5 478 aaPredicted RBP12.08□□□□□ -0.48
RPL28-202ENST00000426763 DOCK6Q96HP0 2047 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 C9orf170A2RU37 121 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 RPL36A-HNRNPH2H7BZ11 118 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 TNFSF10P50591 281 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 SSX2Q16385 188 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 C1RLQ9NZP8 487 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 RNF115Q9Y4L5 304 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 PIKFYVEQ9Y2I7 2098 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 SPTA1P02549 2419 aa12.08□□□□□ -0.48
RPL28-202ENST00000426763 OR4A8P0C604 315 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 FAM87AP0C7U9 286 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 OR2B8PP59922 312 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 FLI1Q01543 452 aaPredicted RBP12.07□□□□□ -0.48
RPL28-202ENST00000426763 OR2T6Q8NHC8 308 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 NDFIP1Q9BT67 221 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 BIN3Q9NQY0 253 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 ZDHHC8Q9ULC8 765 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 LOC102723996A0A087X1L8 192 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 IFNL4K9M1U5 179 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 LANCL1O43813 399 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 KDF1Q8NAX2 398 aaPredicted RBP12.07□□□□□ -0.48
RPL28-202ENST00000426763 TPPP3Q9BW30 176 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 SEBOXQ9HB31 216 aaPredicted RBP12.07□□□□□ -0.48
RPL28-202ENST00000426763 OR5AC1P0C628 307 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 F2RP25116 425 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 PRDX2P32119 198 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 HABP2Q14520 560 aaPredicted RBP12.07□□□□□ -0.48
RPL28-202ENST00000426763 MISP3Q96FF7 219 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 OR2V2Q96R30 315 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 PFDN5Q99471 154 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 GSX2Q9BZM3 304 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 RBM38Q9H0Z9 239 aaKnown RBP12.07□□□□□ -0.48
RPL28-202ENST00000426763 CACNG5Q9UF02 275 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 ZNF107Q9UII5 783 aaPredicted RBP12.07□□□□□ -0.48
RPL28-202ENST00000426763 B3GALNT1O75752 331 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 CST7O76096 145 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 SPNP16150 400 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 FSTP19883 344 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 OPRK1P41145 380 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 ASCL1P50553 236 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 TOR2AQ5JU69 321 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 GNG13Q9P2W3 67 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 LHFPL6Q9Y693 200 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 RBP4P02753 201 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 RBM11P57052 281 aaKnown RBP12.07□□□□□ -0.48
RPL28-202ENST00000426763 C11orf87Q6NUJ2 197 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 MRGPRGQ86SM5 289 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 RFLNBQ8N5W9 214 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 NFAM1Q8NET5 270 aaPredicted RBP12.07□□□□□ -0.48
RPL28-202ENST00000426763 RNF122Q9H9V4 155 aa12.07□□□□□ -0.48
RPL28-202ENST00000426763 UBE2L5PA0A1B0GUS4 154 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 RAB5CP51148 216 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 IL13RA2Q14627 380 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms