RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 CD200P41217 278 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 ERVK11-1P61568 191 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 MEF2DQ14814 521 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 PDCD1Q15116 288 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 Q5BKY6 102 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 SIGIRRQ6IA17 410 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 C11orf71Q6IPW1 123 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 WDR82Q6UXN9 313 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 MUC15Q8N387 334 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 OR13C8Q8NGS7 320 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 ITLN1Q8WWA0 313 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 SNAPC3Q92966 411 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 HIST1H2AAQ96QV6 131 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 TMEM246Q9BRR3 403 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 CHST6Q9GZX3 395 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 GPN1Q9HCN4 374 aaPredicted RBP7.56□□□□□ -1.2
HPS4-204ENST00000422379 SLC2A8Q9NY64 477 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 ANAPC10Q9UM13 185 aa7.56□□□□□ -1.2
HPS4-204ENST00000422379 RAI1Q7Z5J4 1906 aaPredicted RBP7.55□□□□□ -1.2
HPS4-204ENST00000422379 PLSCR5A0PG75 271 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 TMEM82A0PJX8 343 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 FAM172BPA6NC97 362 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 C17orf100A8MU93 164 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 HS3ST1O14792 307 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 RGS13O14921 159 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 AKR7A2O43488 359 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 EGR1P18146 543 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 CPT2P23786 658 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 BLVRBP30043 206 aaPredicted RBP7.55□□□□□ -1.2
HPS4-204ENST00000422379 HRH1P35367 487 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 GMFBP60983 142 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 CCL8P80075 99 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 IL24Q13007 206 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 PNLIPRP3Q17RR3 467 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 SCGB2B2Q4G0G5 96 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 LAMTOR1Q6IAA8 161 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 MOGAT3Q86VF5 341 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 ZNF573Q86YE8 665 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 FBXL14Q8N1E6 418 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 Q8NFD4 153 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 PXT1Q8NFP0 134 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 MRGPRFQ96AM1 343 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 SPOCK3Q9BQ16 436 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 NRIP2Q9BQI9 281 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 SLC25A21Q9BQT8 299 aaPredicted RBP7.55□□□□□ -1.2
HPS4-204ENST00000422379 ZNF436Q9C0F3 470 aaPredicted RBP7.55□□□□□ -1.2
HPS4-204ENST00000422379 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.55□□□□□ -1.2
HPS4-204ENST00000422379 DLL4Q9NR61 685 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 MGAT4CQ9UBM8 478 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 SCP2D1Q9UJQ7 156 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 USF3Q68DE3 2245 aa7.55□□□□□ -1.2
HPS4-204ENST00000422379 DISC1C4P0D8 188 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 M0R233 179 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 LY6HO94772 140 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 HTR3BO95264 441 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 PGA5P0DJD9 388 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 DUSP1P28562 367 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 SNU13P55769 128 aaKnown RBP7.54□□□□□ -1.2
HPS4-204ENST00000422379 FAM201AQ5SY85 155 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 ATPAF1Q5TC12 328 aaPredicted RBP7.54□□□□□ -1.2
HPS4-204ENST00000422379 HIST2H2BCQ6DN03 193 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 NLRC3Q7RTR2 1065 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 TMEM200AQ86VY9 491 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 ZNF295-AS1Q8N0V1 137 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 ZSCAN4Q8NAM6 433 aaPredicted RBP7.54□□□□□ -1.2
HPS4-204ENST00000422379 OR11H4Q8NGC9 324 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 ST8SIA4Q92187 359 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 HYLS1Q96M11 299 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 Q96M66 194 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 PECRQ9BY49 303 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 PKIBQ9C010 78 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 METTL9Q9H1A3 318 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 GCM1Q9NP62 436 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 C1orf123Q9NWV4 160 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 IL36GQ9NZH8 169 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 PLEKHA6Q9Y2H5 1048 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 TMEM210A6NLX4 147 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 B9A039 149 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 G3V3Q6 166 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 GEMIN2O14893 280 aaKnown RBP7.54□□□□□ -1.2
HPS4-204ENST00000422379 PMP2P02689 132 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 ADH4P08319 380 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 GSTT2P0CG29 244 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 NAT1P18440 290 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 TBPP20226 339 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 GABRR1P24046 479 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 SELENOVP59797 346 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 UBE2MP61081 183 aaKnown RBP7.54□□□□□ -1.2
HPS4-204ENST00000422379 SNRPD2P62316 118 aaKnown RBP7.54□□□□□ -1.2
HPS4-204ENST00000422379 TNFAIP6P98066 277 aaPredicted RBP7.54□□□□□ -1.2
HPS4-204ENST00000422379 ARFRP1Q13795 201 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 RSU1Q15404 277 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 TAF9Q16594 264 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 SP5Q6BEB4 398 aaPredicted RBP7.54□□□□□ -1.2
HPS4-204ENST00000422379 C17orf107Q6ZR85 190 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 TMED4Q7Z7H5 227 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 SAXO1Q8IYX7 474 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 MUC20Q8N307 709 aaPredicted RBP7.54□□□□□ -1.2
HPS4-204ENST00000422379 C9orf62Q8N4C0 152 aa7.54□□□□□ -1.2
HPS4-204ENST00000422379 SPICQ8N5J4 248 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms