RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 J3QRE1 110 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 TOR1AO14656 332 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 CIB2O75838 187 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 OR2F2O95006 317 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 ALX3O95076 343 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 PF4P02776 101 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 MT-ND2P03891 347 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 LPLP06858 475 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 GDNFP39905 211 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 ALKBH1Q13686 389 aaKnown RBP13.81□□□□□ -0.2
PTCD1-202ENST00000419981 HLA-DRB5Q30154 266 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 ABCA11PQ4W5N1 156 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 KRBOX4Q5JUW0 171 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 MEDAGQ5VYS4 303 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 FOXB2Q5VYV0 432 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 RNF144BQ7Z419 303 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 SAXO1Q8IYX7 474 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 ACBD7Q8N6N7 88 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 CHST4Q8NCG5 386 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 PELI1Q96FA3 418 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 C4orf36Q96KX1 117 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 RBM14Q96PK6 669 aaKnown RBP13.81□□□□□ -0.2
PTCD1-202ENST00000419981 ZCCHC4Q9H5U6 513 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 ING3Q9NXR8 418 aa13.81□□□□□ -0.2
PTCD1-202ENST00000419981 TSSC4Q9Y5U2 329 aaPredicted RBP13.81□□□□□ -0.2
PTCD1-202ENST00000419981 TCRBV4S1A1TA0A5B7 111 aa13.8□□□□□ -0.2
PTCD1-202ENST00000419981 ZNF729A6NN14 1252 aaPredicted RBP13.8□□□□□ -0.2
PTCD1-202ENST00000419981 J3QLW9 94 aa13.8□□□□□ -0.2
PTCD1-202ENST00000419981 HCKP08631 526 aa13.8□□□□□ -0.2
PTCD1-202ENST00000419981 IGLL1P15814 213 aa13.8□□□□□ -0.2
PTCD1-202ENST00000419981 ZNF19P17023 458 aa13.8□□□□□ -0.2
PTCD1-202ENST00000419981 PRRX1P54821 245 aa13.8□□□□□ -0.2
PTCD1-202ENST00000419981 SNRPGP62308 76 aaKnown RBP13.8□□□□□ -0.2
PTCD1-202ENST00000419981 ATXN7L3Q14CW9 347 aaPredicted RBP13.8□□□□□ -0.2
PTCD1-202ENST00000419981 SLC25A30Q5SVS4 291 aa13.8□□□□□ -0.2
PTCD1-202ENST00000419981 Q6P435 159 aa13.8□□□□□ -0.2
PTCD1-202ENST00000419981 CCDC121Q6ZUS5 278 aa13.8□□□□□ -0.2
PTCD1-202ENST00000419981 OR4X2Q8NGF9 303 aa13.8□□□□□ -0.2
PTCD1-202ENST00000419981 MRPL48Q96GC5 212 aaKnown RBP13.8□□□□□ -0.2
PTCD1-202ENST00000419981 COQ2Q96H96 371 aa13.8□□□□□ -0.2
PTCD1-202ENST00000419981 ZNF281Q9Y2X9 895 aa13.8□□□□□ -0.2
PTCD1-202ENST00000419981 DNAH3Q8TD57 4116 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 SNTNA6NMZ2 147 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 OR4C45A6NMZ5 311 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 BUB1B-PAK6H3BSN5 160 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 SLC33A1O00400 549 aaPredicted RBP13.79□□□□□ -0.2
PTCD1-202ENST00000419981 ALPLP05186 524 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 MNDAP41218 407 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 SLC35A2P78381 396 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 RBM39Q14498 530 aaKnown RBP13.79□□□□□ -0.2
PTCD1-202ENST00000419981 TCTEX1D4Q5JR98 221 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 TPTE2P1Q5T6R2 138 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 CCDC144NLQ6NUI1 221 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 WFDC9Q8NEX5 89 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 MYDGFQ969H8 173 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 MYCBPQ99417 103 aaPredicted RBP13.79□□□□□ -0.2
PTCD1-202ENST00000419981 FAM53CQ9NYF3 392 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 OR6C3Q9NZP0 311 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 EXOGQ9Y2C4 368 aaKnown RBP13.79□□□□□ -0.2
PTCD1-202ENST00000419981 MYRFQ9Y2G1 1151 aa13.79□□□□□ -0.2
PTCD1-202ENST00000419981 A0A087X0M5 115 aa13.78□□□□□ -0.2
PTCD1-202ENST00000419981 A0A1B0GX30 115 aa13.78□□□□□ -0.2
PTCD1-202ENST00000419981 OOSP1A8MZH6 123 aa13.78□□□□□ -0.2
PTCD1-202ENST00000419981 M0QZK8 103 aa13.78□□□□□ -0.2
PTCD1-202ENST00000419981 EI24O14681 340 aa13.78□□□□□ -0.2
PTCD1-202ENST00000419981 DEGS1O15121 323 aa13.78□□□□□ -0.2
PTCD1-202ENST00000419981 TMEM225BP0DP42 221 aa13.78□□□□□ -0.2
PTCD1-202ENST00000419981 DBTP11182 482 aaKnown RBP13.78□□□□□ -0.2
PTCD1-202ENST00000419981 OR3A4PP47883 348 aa13.78□□□□□ -0.2
PTCD1-202ENST00000419981 ZP1P60852 638 aa13.78□□□□□ -0.2
PTCD1-202ENST00000419981 KHDC1LQ5JSQ8 128 aa13.78□□□□□ -0.2
PTCD1-202ENST00000419981 PYDC1Q8WXC3 89 aa13.78□□□□□ -0.2
PTCD1-202ENST00000419981 ALG8Q9BVK2 526 aa13.78□□□□□ -0.2
PTCD1-202ENST00000419981 PPIL3Q9H2H8 161 aaKnown RBP13.78□□□□□ -0.2
PTCD1-202ENST00000419981 SH2D7A6NKC9 451 aaPredicted RBP13.77□□□□□ -0.21
PTCD1-202ENST00000419981 LY6LH3BQJ8 138 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 SULT1B1O43704 296 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 AMY1AP04745 511 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 AMY2AP04746 511 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 RPSAP08865 295 aaKnown RBP13.77□□□□□ -0.21
PTCD1-202ENST00000419981 NFYBP25208 207 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 GLP1RP43220 463 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 MTNR1BP49286 362 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 GALEQ14376 348 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 CDK5R1Q15078 307 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 KISS1Q15726 138 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 C17orf58Q2M2W7 97 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 ZIK1Q3SY52 487 aaPredicted RBP13.77□□□□□ -0.21
PTCD1-202ENST00000419981 C9orf152Q5JTZ5 239 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 LHFPL3Q86UP9 236 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 SERPINA12Q8IW75 414 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 OR5D14Q8NGL3 314 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 OR9G1Q8NH87 305 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 TOMM40LQ969M1 308 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 LGALS12Q96DT0 336 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 KIRREL1Q96J84 757 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 MOB4Q9Y3A3 225 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 AMMECR1Q9Y4X0 333 aaPredicted RBP13.77□□□□□ -0.21
PTCD1-202ENST00000419981 HSPE1-MOB4S4R3N1 261 aa13.77□□□□□ -0.21
PTCD1-202ENST00000419981 KBTBD11-OT1A0A1B0GTJ5 212 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms