RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TRAV38-1A0A0B4J264 116 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 OOEPA6NGQ2 149 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 OR2AT4A6NND4 320 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 TNFRSF13BO14836 293 aaPredicted RBP11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 NDUFA2O43678 99 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 RP2O75695 350 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 PSG2P11465 335 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 PAX1P15863 534 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 EGR1P18146 543 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 TAS2R19P59542 299 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 OXA1LQ15070 435 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 KCNJ8Q15842 424 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 OLFML2AQ68BL7 652 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 STUMQ69YW2 141 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZNF880Q6PDB4 577 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 SUMF2Q8NBJ7 301 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 CHPT1Q8WUD6 406 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 RDH5Q92781 318 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 FAAP24Q9BTP7 215 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 DPCDQ9BVM2 203 aaPredicted RBP11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 FAM234AQ9H0X4 552 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 CLEC4MQ9H2X3 399 aaPredicted RBP11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZMAT3Q9HA38 289 aaKnown RBP11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 C12orf4Q9NQ89 552 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 MGAT4AQ9UM21 535 aa11.95□□□□□ -0.5
SHMT1P1-201ENST00000419974 IGKV1D-17A0A075B6S4 117 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 RFPL4AA6NLU0 287 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 CENPXA8MT69 81 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 RFPL4AL1F8VTS6 287 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 LGALS8O00214 317 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 WNT9BO14905 357 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZNF737O75373 536 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 DIRAS3O95661 229 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 HPXP02790 462 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 PTHLHP12272 177 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 PRDX2P32119 198 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 HFEQ30201 348 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 ACTBL2Q562R1 376 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 MZT2BQ6NZ67 158 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZNF788Q6ZQV5 615 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 TRAPPC6BQ86SZ2 158 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZNF554Q86TJ5 538 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZNF561Q8N587 486 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 DUSP18Q8NEJ0 188 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 GCDHQ92947 438 aaPredicted RBP11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 SNX22Q96L94 193 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 CMSS1Q9BQ75 279 aaKnown RBP11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZNF581Q9P0T4 197 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 KAAG1Q9UBP8 84 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 AK3Q9UIJ7 227 aa11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 ELF5Q9UKW6 265 aaPredicted RBP11.94□□□□□ -0.5
SHMT1P1-201ENST00000419974 PPIAL4EA0A075B759 164 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 IGHV3-64DA0A0J9YX35 117 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 PPIAL4DF5H284 164 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 LYRM1O43325 122 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 F12P00748 615 aaPredicted RBP11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 PPIAL4FP0DN26 164 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZNF44P15621 663 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 ERP29P30040 261 aaKnown RBP11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 SLC6A1P30531 599 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 FAUP35544 74 aaKnown RBP11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 INPP1P49441 399 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 GUCA2AQ02747 115 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 MADCAM1Q13477 382 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 ARFRP1Q13795 201 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 NKAPLQ5M9Q1 402 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 VAX1Q5SQQ9 334 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 ATAD3CQ5T2N8 411 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 SLC35E4Q6ICL7 350 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZNF497Q6ZNH5 498 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 C17orf107Q6ZR85 190 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 OR5D13Q8NGL4 314 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 PPP1R35Q8TAP8 253 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 NUDCD2Q8WVJ2 157 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 COX4I2Q96KJ9 171 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 CACNG6Q9BXT2 260 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 SHARPINQ9H0F6 387 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 TMEM165Q9HC07 324 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 MYOZ1Q9NP98 299 aaPredicted RBP11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 MBNL3Q9NUK0 354 aaKnown RBP11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 COPZ2Q9P299 210 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 DNAJB11Q9UBS4 358 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 LAMP3Q9UQV4 416 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 PPIAL4AQ9Y536 164 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 CACNG2Q9Y698 323 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 ROS1P08922 2347 aa11.93□□□□□ -0.5
SHMT1P1-201ENST00000419974 ARFGEF3Q5TH69 2177 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 ABCA4P78363 2273 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 K7N7A8 449 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 PSPNO60542 156 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 CYB5R3P00387 301 aaPredicted RBP11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 FCGR3AP08637 254 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 AKAIN1P0CW23 69 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 DUSP1P28562 367 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 EFNA4P52798 201 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 TMEM33P57088 247 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 MRPS15P82914 257 aaKnown RBP11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 MEF2DQ14814 521 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZMYND11Q15326 602 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 CR1LQ2VPA4 569 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms