RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 DOCK7Q96N67 2140 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 DEGS1O15121 323 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 WNT2P09544 360 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 PI3P19957 117 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 LUMP51884 338 aaPredicted RBP12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 MZT1Q08AG7 82 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 TCF15Q12870 199 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 DAZAP2Q15038 168 aaPredicted RBP12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 IAH1Q2TAA2 248 aaPredicted RBP12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 ACSF3Q4G176 576 aaPredicted RBP12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 SPIN3Q5JUX0 258 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 HAGHLQ6PII5 290 aaPredicted RBP12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 LIAT1Q6ZQX7 453 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 SPIN2AQ99865 258 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 SPIN2BQ9BPZ2 258 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 BCL2L14Q9BZR8 327 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 PLSCR4Q9NRQ2 329 aa12.45□□□□□ -0.42
HLA-DPA1-242ENST00000419277 FAM186AA6NE01 2351 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 TRDCB7Z8K6 153 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 ADAP1O75689 374 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 CDS2O95674 445 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 GAPDHP04406 335 aaKnown RBP12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 PRSS12P56730 875 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 PMP22Q01453 160 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 C3orf36Q3SXR2 165 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 OR4A4PQ8NGN8 299 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 OR1S1Q8NH92 325 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 TOMM40LQ969M1 308 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 CNTNAP3BQ96NU0 1288 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 RNF126Q9BV68 326 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 CNTNAP3Q9BZ76 1288 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 AMDHD2Q9Y303 409 aa12.44□□□□□ -0.42
HLA-DPA1-242ENST00000419277 MBD3L4A6NDZ8 208 aaPredicted RBP12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 MBD3L3A6NE82 208 aaPredicted RBP12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 MBD3L5A6NJ08 208 aaPredicted RBP12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 A8MXK9 166 aa12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 TUSC2O75896 110 aa12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 PRKACAP17612 351 aa12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 TMEM187Q14656 261 aa12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 ZNF880Q6PDB4 577 aa12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 UQCC3Q6UW78 93 aa12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 BAP18Q8IXM2 172 aa12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 CMTM1Q8IZ96 169 aa12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 FAM71E2Q8N5Q1 922 aa12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 MBD3L2Q8NHZ7 208 aaPredicted RBP12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 NEK7Q8TDX7 302 aa12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 OR10C1Q96KK4 312 aa12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 FGF23Q9GZV9 251 aaPredicted RBP12.43□□□□□ -0.42
HLA-DPA1-242ENST00000419277 WDR1O75083 606 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 DEDDO75618 318 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 HOXD4P09016 255 aaPredicted RBP12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 FGF2P09038 288 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 DUSP1P28562 367 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 UCP2P55851 309 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 ATXN7L3Q14CW9 347 aaPredicted RBP12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 DEFB109BQ30KR1 87 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 BEND4Q6ZU67 534 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 ZNF565Q8N9K5 539 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 RNF141Q8WVD5 230 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 IL22RA2Q969J5 263 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 CABLES2Q9BTV7 478 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 ADAT1Q9BUB4 502 aaKnown RBP12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 PIGMQ9H3S5 423 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 GLS2Q9UI32 602 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 FREM2Q5SZK8 3169 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 E5RGE8 158 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 GPR31O00270 319 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 TM4SF5O14894 197 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 CRYABP02511 175 aaKnown RBP12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 HOXB5P09067 269 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 OR5AC1P0C628 307 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 IL32P24001 234 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 KIR2DL2P43627 348 aaPredicted RBP12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 KCNJ3P48549 501 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 NOVA1P51513 510 aaKnown RBP12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 IDH3GP51553 393 aaPredicted RBP12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 RAB32Q13637 225 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 ZNF146Q15072 292 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 GGNBP1Q5YKI7 109 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 OR2T2Q6IF00 324 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 LDLRAD3Q86YD5 345 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 GAPTQ8N292 157 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 SUMF2Q8NBJ7 301 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 NAXEQ8NCW5 288 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 BHLHE23Q8NDY6 225 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 OR5T2Q8NGG2 359 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 MARS2Q96GW9 593 aaKnown RBP12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 KIRREL1Q96J84 757 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 NSG2Q9Y328 171 aa12.42□□□□□ -0.42
HLA-DPA1-242ENST00000419277 H0YIZ8 118 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 SYNGR1O43759 233 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 JTBO76095 146 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 IGLV1-44P01699 117 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 PGA5P0DJD9 388 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 AADACP22760 399 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 CA6P23280 308 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 FXYD4P59646 89 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 ERVK11-1P61568 191 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 HLA-DRB3P79483 266 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 GPR157Q5UAW9 335 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms