RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 A0A087X0M5 115 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 A0A1B0GX30 115 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 ODAMA1E959 279 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 MT-ND2P03891 347 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 CSN2P05814 226 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 ZNF44P15621 663 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 CEACAM3P40198 252 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 KRTAP10-11P60412 298 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 SCN1BQ07699 218 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 KCTD20Q7Z5Y7 419 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 OR51A4Q8NGJ6 313 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 OR5D18Q8NGL1 313 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 OR13C9Q8NGT0 318 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 CREB3L1Q96BA8 519 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 OAZ3Q9UMX2 235 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 PCDHGB5Q9Y5G0 923 aa11.79□□□□□ -0.52
RPS28-201ENST00000417088 J3QRE1 110 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 SLC33A1O00400 549 aaPredicted RBP11.78□□□□□ -0.52
RPS28-201ENST00000417088 TOR1AO14656 332 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 SLC16A6O15403 523 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 OCM2P0CE71 109 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 OCMP0CE72 109 aaPredicted RBP11.78□□□□□ -0.52
RPS28-201ENST00000417088 FCGR1AP12314 374 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 PTGFRP43088 359 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 OR3A4PP47883 348 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 CCR9P51686 369 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 PRRX1P54821 245 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 BNIP1Q12981 228 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 C17orf58Q2M2W7 97 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 KRBOX4Q5JUW0 171 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 VAX1Q5SQQ9 334 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 SAXO1Q8IYX7 474 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 CHST4Q8NCG5 386 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 OR4D6Q8NGJ1 314 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 OSBPL10Q9BXB5 764 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 RHOFQ9HBH0 211 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 ING3Q9NXR8 418 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 DNAH9Q9NYC9 4486 aa11.78□□□□□ -0.52
RPS28-201ENST00000417088 WI2-2373I1.2A0A1W2PRP0 233 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 DAPL1A0PJW8 107 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 OR4C45A6NMZ5 311 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 ZNF729A6NN14 1252 aaPredicted RBP11.77□□□□□ -0.53
RPS28-201ENST00000417088 OOSP1A8MZH6 123 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 M0QZK8 103 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 DEGS1O15121 323 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 DUS4LO95620 317 aaKnown RBP11.77□□□□□ -0.53
RPS28-201ENST00000417088 HTR1AP08908 422 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 CGB3P0DN86 165 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 CGB7P0DN87 165 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 MNDAP41218 407 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 ATXN7L3Q14CW9 347 aaPredicted RBP11.77□□□□□ -0.53
RPS28-201ENST00000417088 CDK5R1Q15078 307 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 KHDC1LQ5JSQ8 128 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 C9orf152Q5JTZ5 239 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 OSR2Q8N2R0 312 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 LINC00482Q8N8I6 264 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 OR13C3Q8NGS6 347 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 TRUB1Q8WWH5 349 aaKnown RBP11.77□□□□□ -0.53
RPS28-201ENST00000417088 RNFT2Q96EX2 444 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 PELI1Q96FA3 418 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 CENPNQ96H22 339 aaPredicted RBP11.77□□□□□ -0.53
RPS28-201ENST00000417088 PPIL3Q9H2H8 161 aaKnown RBP11.77□□□□□ -0.53
RPS28-201ENST00000417088 NEK6Q9HC98 313 aa11.77□□□□□ -0.53
RPS28-201ENST00000417088 COL7A1Q02388 2944 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 KBTBD11-OT1A0A1B0GTJ5 212 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 FAM90A18PA6NE21 464 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 FAM90A16PA6NEW6 464 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 FAM90A20PA6NIJ5 464 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 SAC3D1A6NKF1 404 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 FAM90A9PA6NNJ1 464 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 FAM90A12PA8MX19 464 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 FAM90A5PA8MXJ8 464 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 FAM90A15PP0C7V4 464 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 FAM90A13PP0C7W8 464 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 FAM90A14PP0C7W9 464 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 FAM90A24PP0C7X0 464 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 NFYBP25208 207 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 RBM39Q14498 530 aaKnown RBP11.76□□□□□ -0.53
RPS28-201ENST00000417088 DEFB121Q5J5C9 76 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 SLC25A30Q5SVS4 291 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 C1orf146Q5VVC0 180 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 CCDC144NLQ6NUI1 221 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 OR9G1Q8NH87 305 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 KIRREL1Q96J84 757 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 HRASLS5Q96KN8 279 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 ZCCHC4Q9H5U6 513 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 IMPAD1Q9NX62 359 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 OR6C3Q9NZP0 311 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 MYRFQ9Y2G1 1151 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 MOB4Q9Y3A3 225 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 HSPE1-MOB4S4R3N1 261 aa11.76□□□□□ -0.53
RPS28-201ENST00000417088 PSMB11A5LHX3 300 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 J3QLW9 94 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 CLIC3O95833 236 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 FAM106CPP0CH98 169 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 TMEM225BP0DP42 221 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 ZNF19P17023 458 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 HOXD3P31249 432 aaPredicted RBP11.75□□□□□ -0.53
RPS28-201ENST00000417088 ZP1P60852 638 aa11.75□□□□□ -0.53
RPS28-201ENST00000417088 EGFEM1PQ0D2K5 195 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms