RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 PIGCQ92535 297 aa16.91■□□□□ 0.3
PTPRU-203ENST00000415600 RNF170Q96K19 258 aa16.91■□□□□ 0.3
PTPRU-203ENST00000415600 ABCG5Q9H222 651 aa16.91■□□□□ 0.3
PTPRU-203ENST00000415600 MGAM2Q2M2H8 2515 aa16.91■□□□□ 0.3
PTPRU-203ENST00000415600 CENPVL3A0A0U1RRI6 287 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 ZNF816-ZNF321PA0A0X1KG74 233 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 MMP9P14780 707 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 ARF6P62330 175 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 HOXA4Q00056 320 aaPredicted RBP16.9■□□□□ 0.3
PTPRU-203ENST00000415600 ASAH1Q13510 395 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 TRIQKQ629K1 86 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 ZNF529Q6P280 563 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 Q6YL49 198 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 Q6ZSR3 168 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 WDR86Q86TI4 376 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 CCDC54Q8NEL0 328 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 OR51A2Q8NGJ7 313 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 OR4F5Q8NH21 305 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 OR5P3Q8WZ94 311 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 ADAT3Q96EY9 351 aaPredicted RBP16.9■□□□□ 0.3
PTPRU-203ENST00000415600 MED30Q96HR3 178 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 TBX15Q96SF7 602 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 CCL13Q99616 98 aa16.9■□□□□ 0.3
PTPRU-203ENST00000415600 IGHV1-69DA0A0B4J2H0 117 aa16.89■□□□□ 0.3
PTPRU-203ENST00000415600 IGHV1-69P01742 117 aa16.89■□□□□ 0.3
PTPRU-203ENST00000415600 RPL15P61313 204 aaKnown RBP16.89■□□□□ 0.3
PTPRU-203ENST00000415600 PITPNAQ00169 270 aa16.89■□□□□ 0.3
PTPRU-203ENST00000415600 RAB11BQ15907 218 aa16.89■□□□□ 0.3
PTPRU-203ENST00000415600 ATPAF1Q5TC12 328 aaPredicted RBP16.89■□□□□ 0.3
PTPRU-203ENST00000415600 LYPD6Q86Y78 171 aa16.89■□□□□ 0.3
PTPRU-203ENST00000415600 OR5D14Q8NGL3 314 aa16.89■□□□□ 0.3
PTPRU-203ENST00000415600 LHX4Q969G2 390 aa16.89■□□□□ 0.3
PTPRU-203ENST00000415600 FOXRED1Q96CU9 486 aaPredicted RBP16.89■□□□□ 0.3
PTPRU-203ENST00000415600 SIRPDQ9H106 197 aa16.89■□□□□ 0.3
PTPRU-203ENST00000415600 BEX1Q9HBH7 125 aa16.89■□□□□ 0.3
PTPRU-203ENST00000415600 ONECUT1Q9UBC0 465 aa16.89■□□□□ 0.3
PTPRU-203ENST00000415600 FAM96BQ9Y3D0 163 aa16.89■□□□□ 0.3
PTPRU-203ENST00000415600 MDFIC2A0A1B0GVS7 189 aa16.89■□□□□ 0.29
PTPRU-203ENST00000415600 A6NIN4 97 aa16.89■□□□□ 0.29
PTPRU-203ENST00000415600 ZNF20P17024 532 aa16.89■□□□□ 0.29
PTPRU-203ENST00000415600 GUCA2AQ02747 115 aa16.89■□□□□ 0.29
PTPRU-203ENST00000415600 C1orf100Q5SVJ3 147 aa16.89■□□□□ 0.29
PTPRU-203ENST00000415600 GDPD3Q7L5L3 318 aa16.89■□□□□ 0.29
PTPRU-203ENST00000415600 OR6M1Q8NGM8 313 aa16.89■□□□□ 0.29
PTPRU-203ENST00000415600 OR14K1Q8NGZ2 314 aa16.89■□□□□ 0.29
PTPRU-203ENST00000415600 NPRL2Q8WTW4 380 aa16.89■□□□□ 0.29
PTPRU-203ENST00000415600 ABHD1Q96SE0 405 aa16.89■□□□□ 0.29
PTPRU-203ENST00000415600 MMP24Q9Y5R2 645 aa16.89■□□□□ 0.29
PTPRU-203ENST00000415600 CTDSPLO15194 276 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 ACKR3P25106 362 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 HTR2CP28335 458 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 BDKRB2P30411 391 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 GNG3P63215 75 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 RIPPLY1Q0D2K3 151 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 IKZF1Q13422 519 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 FAM76BQ5HYJ3 339 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 PRR31Q5SQ13 230 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 RUSC1-AS1Q66K80 236 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 KIR3DL3Q8N743 410 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 DTX3Q8N9I9 347 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 S100A16Q96FQ6 103 aaKnown RBP16.88■□□□□ 0.29
PTPRU-203ENST00000415600 LYZL4Q96KX0 146 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 TMEM138Q9NPI0 162 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 SOX21Q9Y651 276 aaPredicted RBP16.88■□□□□ 0.29
PTPRU-203ENST00000415600 V9GYS6 101 aa16.88■□□□□ 0.29
PTPRU-203ENST00000415600 OR5B21A6NL26 309 aa16.87■□□□□ 0.29
PTPRU-203ENST00000415600 MTRF1O75570 445 aaKnown RBP16.87■□□□□ 0.29
PTPRU-203ENST00000415600 TPPPO94811 219 aa16.87■□□□□ 0.29
PTPRU-203ENST00000415600 RAB3AP20336 220 aa16.87■□□□□ 0.29
PTPRU-203ENST00000415600 ZBTB37Q5TC79 503 aa16.87■□□□□ 0.29
PTPRU-203ENST00000415600 STUMQ69YW2 141 aa16.87■□□□□ 0.29
PTPRU-203ENST00000415600 FIP1L1Q6UN15 594 aaKnown RBP16.87■□□□□ 0.29
PTPRU-203ENST00000415600 OR51D1Q8NGF3 324 aa16.87■□□□□ 0.29
PTPRU-203ENST00000415600 FAM3DQ96BQ1 224 aa16.87■□□□□ 0.29
PTPRU-203ENST00000415600 DPAGT1Q9H3H5 408 aa16.87■□□□□ 0.29
PTPRU-203ENST00000415600 TNFRSF19Q9NS68 423 aa16.87■□□□□ 0.29
PTPRU-203ENST00000415600 RHBDL2Q9NX52 303 aa16.87■□□□□ 0.29
PTPRU-203ENST00000415600 BTBD17A6NE02 478 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 FAM181BA6NEQ2 426 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 MELTFP08582 738 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 MNDAP41218 407 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 POU3F4P49335 361 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 GPM6AP51674 278 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 CAPZA1P52907 286 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 GMFBP60983 142 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 HACD4Q5VWC8 232 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 C17orf107Q6ZR85 190 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 VMO1Q7Z5L0 202 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 FAM216BQ8N7L0 139 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 LY6G5BQ8NDX9 201 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 H1FXQ92522 213 aaKnown RBP16.86■□□□□ 0.29
PTPRU-203ENST00000415600 DYRK2Q92630 601 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 TRIM63Q969Q1 353 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 RFT1Q96AA3 541 aa16.86■□□□□ 0.29
PTPRU-203ENST00000415600 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.85■□□□□ 0.29
PTPRU-203ENST00000415600 PLA2G10O15496 165 aa16.85■□□□□ 0.29
PTPRU-203ENST00000415600 SULT1B1O43704 296 aa16.85■□□□□ 0.29
PTPRU-203ENST00000415600 DHRS3O75911 302 aa16.85■□□□□ 0.29
PTPRU-203ENST00000415600 KNG1P01042 644 aa16.85■□□□□ 0.29
PTPRU-203ENST00000415600 SPNP16150 400 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms