RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 CYTIPO60759 359 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 ELLP55199 621 aaPredicted RBP9.75□□□□□ -0.85
PTPRF-204ENST00000412568 SNRPEP62304 92 aaKnown RBP9.75□□□□□ -0.85
PTPRF-204ENST00000412568 DCAF12L2Q5VW00 463 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 ZNF485Q8NCK3 441 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 OR5M8Q8NGP6 311 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 EGLN1Q9GZT9 426 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 DOCK10Q96BY6 2186 aa9.75□□□□□ -0.85
PTPRF-204ENST00000412568 DUS4LO95620 317 aaKnown RBP9.74□□□□□ -0.85
PTPRF-204ENST00000412568 HBE1P02100 147 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 CD37P11049 281 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 FPR2P25090 351 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 RAB32Q13637 225 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 TMEM41BQ5BJD5 291 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 TMEM123Q8N131 208 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 OR4A16Q8NH70 328 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 FGF11Q92914 225 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 CHST5Q9GZS9 411 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 SLC39A9Q9NUM3 307 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 AK3Q9UIJ7 227 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 KLK13Q9UKR3 277 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 HEATR1Q9H583 2144 aaKnown RBP9.74□□□□□ -0.85
PTPRF-204ENST00000412568 ABCA1O95477 2261 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 TERTO14746 1132 aaKnown RBP9.74□□□□□ -0.85
PTPRF-204ENST00000412568 SHOXO15266 292 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 EFNA2O43921 213 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 HTD2P86397 168 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 PDLIM3Q53GG5 364 aaPredicted RBP9.74□□□□□ -0.85
PTPRF-204ENST00000412568 IGSF11Q5DX21 431 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 MRGPRDQ8TDS7 321 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 GPHA2Q96T91 129 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 OPN3Q9H1Y3 402 aaPredicted RBP9.74□□□□□ -0.85
PTPRF-204ENST00000412568 TANC1Q9C0D5 1861 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 ACACBO00763 2458 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 PLXND1Q9Y4D7 1925 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 ONECUT2O95948 504 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 HPNP05981 417 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 H2AFB1P0C5Y9 115 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 ZFP36L1Q07352 338 aaKnown RBP9.74□□□□□ -0.85
PTPRF-204ENST00000412568 ZNF266Q14584 549 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 MPPED2Q15777 294 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 PRAMEF5Q5TYX0 476 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 PRAMEF6Q5VXH4 476 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 ADAD2Q8NCV1 583 aaKnown RBP9.74□□□□□ -0.85
PTPRF-204ENST00000412568 OR6S1Q8NH40 331 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 LRRC29Q8WV35 223 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 AKR1E2Q96JD6 320 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 SLC26A1Q9H2B4 701 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 RHOFQ9HBH0 211 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 FAM96BQ9Y3D0 163 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 TECTAO75443 2155 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 HTTP42858 3142 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 HMSDA8MTL9 139 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 JTBO76095 146 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 SCAF4O95104 1147 aaKnown RBP9.74□□□□□ -0.85
PTPRF-204ENST00000412568 SFT2D2O95562 160 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 CTXN2P0C2S0 81 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 GABRA1P14867 456 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 GPR12P47775 334 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 RPS23P62266 143 aaKnown RBP9.74□□□□□ -0.85
PTPRF-204ENST00000412568 TLE4Q04727 773 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 H2BFWTQ7Z2G1 175 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 LRRC75AQ8NAA5 344 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 OR13G1Q8NGZ3 307 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 RAB39BQ96DA2 213 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 G6PC2Q9NQR9 355 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 DEPPQ9NTK1 212 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 FAM206AQ9NX38 181 aa9.74□□□□□ -0.85
PTPRF-204ENST00000412568 RNF212BA8MTL3 300 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 GPR31O00270 319 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 PHOX2AO14813 284 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 WISP1O95388 367 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 IGF2P01344 180 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 OR5AC1P0C628 307 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 CEACAM6P40199 344 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 OR3A1P47881 315 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 F2RL1P55085 397 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 SMIM21Q3B7S5 101 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 FNDC7Q5VTL7 733 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 SLC16A13Q7RTY0 426 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 ZNF561Q8N587 486 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 OR1S2Q8NGQ3 325 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 PLK3Q9H4B4 646 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 ANXA10Q9UJ72 324 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 J3QRE1 110 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 TAS2R30P59541 319 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 BAXQ07812 192 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 TUSC1Q2TAM9 212 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 RNF212Q495C1 297 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 RPS4Y2Q8TD47 263 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 GALMQ96C23 342 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 MMP24Q9Y5R2 645 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 CFDP00746 253 aaPredicted RBP9.73□□□□□ -0.85
PTPRF-204ENST00000412568 HOXA1P49639 335 aaPredicted RBP9.73□□□□□ -0.85
PTPRF-204ENST00000412568 UBE2V2Q15819 145 aa9.73□□□□□ -0.85
PTPRF-204ENST00000412568 HES1Q14469 280 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 CLEC18BQ6UXF7 455 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 ZNF826PQ6ZT77 177 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 TIMP4Q99727 224 aa9.72□□□□□ -0.85
PTPRF-204ENST00000412568 LPAR5Q9H1C0 372 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms