RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 QTRT1Q9BXR0 403 aaKnown RBP4.09□□□□□ -1.76
PTPN13-202ENST00000411767 STARD5Q9NSY2 213 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 TAS2R4Q9NYW5 299 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 VAX2Q9UIW0 290 aa4.09□□□□□ -1.76
PTPN13-202ENST00000411767 C11orf94C9JXX5 98 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 INS-IGF2F8WCM5 200 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 INSP01308 110 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 IL2RAP01589 272 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 ESDP10768 282 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 STARD6P59095 220 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 P2RY6Q15077 328 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 HFEQ30201 348 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 LINC01559Q495D7 138 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 RGMBQ6NW40 437 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 GATAD1Q8WUU5 269 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 FLYWCH2Q96CP2 140 aaKnown RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF414Q96IQ9 312 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 SNX22Q96L94 193 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 SDHCQ99643 169 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 PRRX2Q99811 253 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TREX1Q9NSU2 369 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 OR51B2Q9Y5P1 312 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TEX22C9J3V5 150 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 P2RY1P47900 373 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TRA2BP62995 288 aaKnown RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 DCAF12Q5T6F0 453 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 PEX11GQ96HA9 241 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 MS4A4AQ96JQ5 239 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 GATA5Q9BWX5 397 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 PLA2G12AQ9BZM1 189 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TXNRD2Q9NNW7 524 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 HIGD1AQ9Y241 93 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 ABCA9Q8IUA7 1624 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TRAV9-1A0A075B6T8 112 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 A0A0G2JMM0 328 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 A0A1W2PPB8 328 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 KIR3DP1A8MWS1 328 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 PSCAO43653 123 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 NCR2O95944 276 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 HOXA6P31267 233 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 CEACAM6P40199 344 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 GDF6Q6KF10 455 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 PIM3Q86V86 326 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 LGALS14Q8TCE9 139 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 MZB1Q8WU39 189 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 NEURL4Q96JN8 1562 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TINAGL1Q9GZM7 467 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 GORASP2Q9H8Y8 452 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 DUOX2Q9NRD8 1548 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 KDM5CP41229 1560 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 A0A087WV62 115 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF593O00488 134 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 IGHG3P01860 377 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 SHBGP04278 402 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 MUC1P15941 1255 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 OPRL1P41146 370 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 CLDN15P56746 228 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 INSM1Q01101 510 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 NECTIN1Q15223 517 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 SMAD2Q15796 467 aaKnown RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 SCD5Q86SK9 330 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 ZDHHC23Q8IYP9 409 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 METTL27Q8N6F8 245 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 LRRC75AQ8NAA5 344 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 PPP1R1CQ8WVI7 109 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF257Q9Y2Q1 563 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TIMM10BQ9Y5J6 103 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 MBLAC1A4D2B0 266 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM238C9JI98 176 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 IL13RA2Q14627 380 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 OCIAD2Q56VL3 154 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM42Q69YG0 159 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 CLEC20AQ6ZU45 233 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 FAM156AQ8NDB6 213 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 SLC25A40Q8TBP6 338 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 C17orf77Q96MU5 243 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TOMM7Q9P0U1 55 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 OARD1Q9Y530 152 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 HS3ST3B1Q9Y662 390 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TRAV8-1A0A0A6YYK1 113 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 J3QR06 171 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 YPEL1O60688 119 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 ANOS1P23352 680 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 PSG5Q15238 335 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 GAGE13Q4V321 117 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 MS4A13Q5J8X5 152 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 CXorf66Q5JRM2 361 aaPredicted RBP4.08□□□□□ -1.76
PTPN13-202ENST00000411767 BHLHA9Q7RTU4 235 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 SP8Q8IXZ3 490 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 PNKDQ8N490 385 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 GATD1Q8NB37 220 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 CADM4Q8NFZ8 388 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 CLDN23Q96B33 292 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF479Q96JC4 524 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 U3KQE9 123 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 GFYI3L273 518 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TSPAN12O95859 305 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 IER3P46695 156 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 CD300EQ496F6 205 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms