RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 DPPA2Q7Z7J5 298 aa14.38□□□□□ -0.11
LIMS2-208ENST00000410011 CALHM1Q8IU99 346 aa14.38□□□□□ -0.11
LIMS2-208ENST00000410011 CPNE4Q96A23 557 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-208ENST00000410011 USB1Q9BQ65 265 aaKnown RBP14.38□□□□□ -0.11
LIMS2-208ENST00000410011 PLEKHF2Q9H8W4 249 aa14.38□□□□□ -0.11
LIMS2-208ENST00000410011 KCNJ16Q9NPI9 418 aa14.38□□□□□ -0.11
LIMS2-208ENST00000410011 SIT1Q9Y3P8 196 aa14.38□□□□□ -0.11
LIMS2-208ENST00000410011 PRUNE2Q8WUY3 3088 aa14.38□□□□□ -0.11
LIMS2-208ENST00000410011 OR7C1O76099 320 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-208ENST00000410011 NAPSAO96009 420 aa14.37□□□□□ -0.11
LIMS2-208ENST00000410011 CCL4P13236 92 aa14.37□□□□□ -0.11
LIMS2-208ENST00000410011 NKX2-1P43699 371 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-208ENST00000410011 FHITP49789 147 aa14.37□□□□□ -0.11
LIMS2-208ENST00000410011 DUSP3P51452 185 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-208ENST00000410011 EIF2S3LQ2VIR3 472 aaKnown RBP14.37□□□□□ -0.11
LIMS2-208ENST00000410011 PAPOLGQ9BWT3 736 aaKnown RBP14.37□□□□□ -0.11
LIMS2-208ENST00000410011 SLC25A31Q9H0C2 315 aa14.37□□□□□ -0.11
LIMS2-208ENST00000410011 SH3BGRL3Q9H299 93 aa14.37□□□□□ -0.11
LIMS2-208ENST00000410011 SPEGQ15772 3267 aa14.37□□□□□ -0.11
LIMS2-208ENST00000410011 LRRC3CA6NJW4 275 aa14.37□□□□□ -0.11
LIMS2-208ENST00000410011 EIF3GO75821 320 aaKnown RBP eCLIP14.37□□□□□ -0.11
LIMS2-208ENST00000410011 SNRNP70P08621 437 aaKnown RBP14.37□□□□□ -0.11
LIMS2-208ENST00000410011 SNRPEP62304 92 aaKnown RBP14.37□□□□□ -0.11
LIMS2-208ENST00000410011 SP5Q6BEB4 398 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-208ENST00000410011 IP6K3Q96PC2 410 aa14.37□□□□□ -0.11
LIMS2-208ENST00000410011 Q9N2K0 584 aa14.37□□□□□ -0.11
LIMS2-208ENST00000410011 LYRM2Q9NU23 88 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-208ENST00000410011 MYO15AQ9UKN7 3530 aa14.37□□□□□ -0.11
LIMS2-208ENST00000410011 SHANK1Q9Y566 2161 aa14.37□□□□□ -0.11
LIMS2-208ENST00000410011 NKX2-6A6NCS4 301 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 LINC01387J3KSC0 135 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 TK1P04183 234 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 CTXN2P0C2S0 81 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 SMIM6P0DI80 62 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 SLC25A26Q70HW3 274 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 HSD17B11Q8NBQ5 300 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 GTF3AQ92664 365 aaKnown RBP14.36□□□□□ -0.11
LIMS2-208ENST00000410011 REPIN1Q9BWE0 567 aaKnown RBP14.36□□□□□ -0.11
LIMS2-208ENST00000410011 LINC00470Q9BZP3 86 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 FSCN3Q9NQT6 498 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 SLC7A10Q9NS82 523 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 P4HTMQ9NXG6 502 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 METTL1Q9UBP6 276 aaKnown RBP14.36□□□□□ -0.11
LIMS2-208ENST00000410011 IGKV3D-15A0A087WSY6 115 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 TMEM265A0A087WTH1 108 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 A0A0G2JMM0 328 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 A0A1W2PPB8 328 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 A0A1W2PRS3 328 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 CCDC85CA6NKD9 419 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 KIR3DP1A8MWS1 328 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 TUSC2O75896 110 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 ACAA1P09110 424 aaPredicted RBP14.36□□□□□ -0.11
LIMS2-208ENST00000410011 PRSS12P56730 875 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 FGF12P61328 243 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 IGSF11Q5DX21 431 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 ZNF695Q8IW36 515 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 SELENOHQ8IZQ5 122 aaKnown RBP14.36□□□□□ -0.11
LIMS2-208ENST00000410011 EXTL1Q92935 676 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 IL22RA2Q969J5 263 aa14.36□□□□□ -0.11
LIMS2-208ENST00000410011 UNKLQ9H9P5 680 aaKnown RBP14.36□□□□□ -0.11
LIMS2-208ENST00000410011 ARID1AO14497 2285 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 TNRC6BQ9UPQ9 1833 aaKnown RBP14.35□□□□□ -0.11
LIMS2-208ENST00000410011 PIGBOS1A0A0B4J2F0 54 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 ZNF587BE7ETH6 402 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 HSPA12AO43301 675 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 C1QL1O75973 258 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 GLI4P10075 376 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 RAB5AP20339 215 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 UCP1P25874 307 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 NPBWR2P48146 333 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 GFRA1P56159 465 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 ID3Q02535 119 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 BAXQ07812 192 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 CLINT1Q14677 625 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 MPV17LQ2QL34 196 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 MEX3BQ6ZN04 569 aaKnown RBP14.35□□□□□ -0.11
LIMS2-208ENST00000410011 TBC1D26Q86UD7 250 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 CPEB3Q8NE35 698 aaKnown RBP14.35□□□□□ -0.11
LIMS2-208ENST00000410011 UBE2J1Q9Y385 318 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-208ENST00000410011 ZNF732B4DXR9 585 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 M0R036 132 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 S100A6P06703 90 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 RFPL3SP0C7P2 107 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 COX5BP10606 129 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 C1QL4Q86Z23 238 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 TMEM252Q8N6L7 170 aa14.35□□□□□ -0.11
LIMS2-208ENST00000410011 KIR2DS1A0A191URI9 304 aa14.34□□□□□ -0.11
LIMS2-208ENST00000410011 FAM24AA6NFZ4 105 aa14.34□□□□□ -0.11
LIMS2-208ENST00000410011 CEACAM1P13688 526 aa14.34□□□□□ -0.11
LIMS2-208ENST00000410011 VDAC1P21796 283 aa14.34□□□□□ -0.11
LIMS2-208ENST00000410011 ATP6V0CP27449 155 aa14.34□□□□□ -0.11
LIMS2-208ENST00000410011 AKR1C3P42330 323 aa14.34□□□□□ -0.11
LIMS2-208ENST00000410011 KIR2DS4P43632 304 aa14.34□□□□□ -0.11
LIMS2-208ENST00000410011 SULT1A1P50225 295 aa14.34□□□□□ -0.11
LIMS2-208ENST00000410011 KIR2DS1Q14954 304 aa14.34□□□□□ -0.11
LIMS2-208ENST00000410011 NMSQ5H8A3 153 aa14.34□□□□□ -0.11
LIMS2-208ENST00000410011 TMEM182Q6ZP80 229 aaPredicted RBP14.34□□□□□ -0.11
LIMS2-208ENST00000410011 PPP1R32Q7Z5V6 425 aa14.34□□□□□ -0.11
LIMS2-208ENST00000410011 GNPNAT1Q96EK6 184 aaPredicted RBP14.34□□□□□ -0.11
LIMS2-208ENST00000410011 TCEAL7Q9BRU2 100 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms