RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ARF6P62330 175 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 COL10A1Q03692 680 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 PDZK1IP1Q13113 114 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 SKP2Q13309 424 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 Q8WTZ3 238 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 TMEM37Q8WXS4 190 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 LEAP2Q969E1 77 aa7.44□□□□□ -1.22
SCN9A-203ENST00000409672 IGHV3-48P01763 117 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 HOXC4P09017 264 aaPredicted RBP7.43□□□□□ -1.22
SCN9A-203ENST00000409672 RSG1Q9BU20 258 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 NTN4Q9HB63 628 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 AURKAIP1Q9NWT8 199 aaPredicted RBP7.43□□□□□ -1.22
SCN9A-203ENST00000409672 ERVS71-1P61550 626 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 OR2A5Q96R48 311 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 OR2J1Q9GZK6 312 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 WDR13Q9H1Z4 485 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 ZNF586Q9NXT0 402 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 OR1L1Q8NH94 360 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 GPBAR1Q8TDU6 330 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 ZNF488Q96MN9 340 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 TJP1Q07157 1748 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 LRRC37A3O60309 1634 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 TBX19O60806 448 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 LALBAP00709 142 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 OR5AC1P0C628 307 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 FUT3P21217 361 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 ID1P41134 155 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 LCN2P80188 198 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 CMPK2Q5EBM0 449 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 MDP1Q86V88 176 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 GVQW1Q8N7I0 195 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 S4R3C0 116 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 A0A0A6YYD5 115 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 ACSM4P0C7M7 580 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 ACVR1Q04771 509 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 HCP5Q6MZN7 132 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 GLDNQ6ZMI3 551 aaPredicted RBP7.43□□□□□ -1.22
SCN9A-203ENST00000409672 OR1N2Q8NGR9 330 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 MRAP2Q96G30 205 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 MS4A3Q96HJ5 214 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 PDFQ9HBH1 243 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 EPPINO95925 133 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 RAB7AP51149 207 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 CACNG7P62955 275 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 KRTCAP3Q53RY4 240 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 PPP1R1CQ8WVI7 109 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 RASL10BQ96S79 203 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 JTBO76095 146 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 PSMB6P28072 239 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 CSF2RBP32927 897 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 HIST1H3AP68431 136 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 DHODHQ02127 395 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 DDB2Q92466 427 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 NEURL2Q9BR09 285 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 ZNF665Q9H7R5 613 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 MMP15P51511 669 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 SLC25A46Q96AG3 418 aa7.43□□□□□ -1.22
SCN9A-203ENST00000409672 DYNLT3P51808 116 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 PRICKLE4Q2TBC4 344 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 PIGYQ3MUY2 71 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 ZNF658BQ4V348 819 aaPredicted RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 FAM26EQ8N5C1 309 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 PAPPA2Q9BXP8 1791 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 DOCK10Q96BY6 2186 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 IGHV3OR16-13A0A075B7E8 117 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 IGHV3-74A0A0B4J1X5 117 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 LANCL1O43813 399 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 GCGP01275 180 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 TTRP02766 147 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 ZNF26P17031 533 aaPredicted RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 NXPH1P58417 271 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 SLC38A11Q08AI6 406 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 PJVKQ0ZLH3 352 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 IGFBP7Q16270 282 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 FAM74A4Q5TZK3 123 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 OR4X1Q8NH49 305 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 SGMS2Q8NHU3 365 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 ADAMTSL1Q8N6G6 1762 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 TMEM272A0A1B0GTI8 110 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 PSMB11A5LHX3 300 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 PHOX2AO14813 284 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 CD82P27701 267 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 OR4P4Q8NGL7 312 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 OR10AC1Q8NH08 325 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 ITLN2Q8WWU7 325 aaPredicted RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 PARD6AQ9NPB6 346 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 RAXQ9Y2V3 346 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 C3orf85A0A1B0GTC6 90 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 HNRNPA3P51991 378 aaKnown RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 PSG5Q15238 335 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 CBLN3Q6UW01 205 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 Q6ZNB5 142 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 KCTD12Q96CX2 325 aaKnown RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 LPAR5Q9H1C0 372 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 C1RLQ9NZP8 487 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 MOB4Q9Y3A3 225 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 YTHDF2Q9Y5A9 579 aaKnown RBP7.42□□□□□ -1.22
SCN9A-203ENST00000409672 TRDV1A0A1B0GX56 115 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 IGHA1P01876 353 aa7.42□□□□□ -1.22
SCN9A-203ENST00000409672 IGHA2P01877 340 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms