RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 CD83Q01151 205 aa11.23□□□□□ -0.61
CEACAM1-206ENST00000403136 SRSF7Q16629 238 aaKnown RBP eCLIP11.23□□□□□ -0.61
CEACAM1-206ENST00000403136 ADAM5Q6NVV9 412 aa11.23□□□□□ -0.61
CEACAM1-206ENST00000403136 ACP7Q6ZNF0 438 aa11.23□□□□□ -0.61
CEACAM1-206ENST00000403136 Q6ZPA2 131 aa11.23□□□□□ -0.61
CEACAM1-206ENST00000403136 TMED4Q7Z7H5 227 aa11.23□□□□□ -0.61
CEACAM1-206ENST00000403136 LHFPL1Q86WI0 220 aa11.23□□□□□ -0.61
CEACAM1-206ENST00000403136 WDR13Q9H1Z4 485 aa11.23□□□□□ -0.61
CEACAM1-206ENST00000403136 RANGRFQ9HD47 186 aaPredicted RBP11.23□□□□□ -0.61
CEACAM1-206ENST00000403136 ZDHHC8Q9ULC8 765 aa11.23□□□□□ -0.61
CEACAM1-206ENST00000403136 NBEAQ8NFP9 2946 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 SHISA9B4DS77 424 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 CREBL2O60519 120 aaPredicted RBP11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 EIF2B2P49770 351 aaKnown RBP11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 SPRNQ5BIV9 151 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 ZNF626Q68DY1 528 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 Q6ZS49 121 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 GALNT11Q8NCW6 608 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 OR10Z1Q8NGY1 313 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 MARCH1Q8TCQ1 289 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 LRRC29Q8WV35 223 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 CAPSLQ8WWF8 208 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 FYTTD1Q96QD9 318 aaKnown RBP11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 Q9N2K0 584 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 NECAP2Q9NVZ3 263 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 ING3Q9NXR8 418 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 RASL12Q9NYN1 266 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 IL19Q9UHD0 177 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 GLS2Q9UI32 602 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 GPR132Q9UNW8 380 aa11.22□□□□□ -0.61
CEACAM1-206ENST00000403136 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 CEACAM18A8MTB9 384 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 SIRPB1O00241 398 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 SLC33A1O00400 549 aaPredicted RBP11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 HAND1O96004 215 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 IGHV1-46P01743 117 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 CD3EP07766 207 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 OR4E1P0C645 316 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 GSTT2P0CG29 244 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 OR5H8P0DN80 308 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 LMO1P25800 156 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 GATA4P43694 442 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 C4orf46Q504U0 113 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 PAN3Q58A45 887 aaKnown RBP11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 AADACL3Q5VUY0 350 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 DHRS11Q6UWP2 260 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 SLC25A42Q86VD7 318 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 DMRTC2Q8IXT2 367 aaPredicted RBP11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 OR11H7Q8NGC8 314 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 OR52B4Q8NGK2 314 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 ITLN1Q8WWA0 313 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 SCGB3A2Q96PL1 93 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 FN3KRPQ9HA64 309 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 TREM2Q9NZC2 230 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 ZNF69Q9UC07 566 aa11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 DIDO1Q9BTC0 2240 aaKnown RBP11.21□□□□□ -0.61
CEACAM1-206ENST00000403136 TRBV6-6A0A0A6YYG2 114 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 TUBAL3A6NHL2 446 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 E7EQL1 145 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 KNG1P01042 644 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 SULT1A3P0DMM9 295 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 SULT1A4P0DMN0 295 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 GNLYP22749 145 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 TNFSF4P23510 183 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 NPY4RP50391 375 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 TNFAIP6P98066 277 aaPredicted RBP11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 HOXA4Q00056 320 aaPredicted RBP11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 C4orf17Q53FE4 359 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 SHEQ5VZ18 495 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 ZNF660Q6AZW8 331 aaPredicted RBP11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 C17orf107Q6ZR85 190 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 MOGAT3Q86VF5 341 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 MRPL30Q8TCC3 161 aaKnown RBP11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 DMRTB1Q96MA1 342 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 TMEM165Q9HC07 324 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 OR14J1Q9UGF5 321 aa11.21□□□□□ -0.62
CEACAM1-206ENST00000403136 OR5H14A6NHG9 310 aa11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 POM121CA8CG34 1229 aa11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 SRRM5B3KS81 715 aa11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 CXCL3P19876 107 aa11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 SERPINF1P36955 418 aa11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 MDH2P40926 338 aaKnown RBP11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 TFF3Q07654 80 aa11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 SMIM21Q3B7S5 101 aa11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 BEX5Q5H9J7 111 aa11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 C20orf204Q6ZNR8 217 aa11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 PEG10Q86TG7 708 aaKnown RBP11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 TCTE3Q8IZS6 198 aa11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 MUC20Q8N307 709 aaPredicted RBP11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 ZNF431Q8TF32 576 aaPredicted RBP11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 DIRC2Q96SL1 478 aa11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 ZNF2Q9BSG1 426 aaPredicted RBP11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 ROS1P08922 2347 aa11.2□□□□□ -0.62
CEACAM1-206ENST00000403136 RFPL4AA6NLU0 287 aa11.19□□□□□ -0.62
CEACAM1-206ENST00000403136 TRDCB7Z8K6 153 aa11.19□□□□□ -0.62
CEACAM1-206ENST00000403136 RFPL4AL1F8VTS6 287 aa11.19□□□□□ -0.62
CEACAM1-206ENST00000403136 H7C1Q1 480 aa11.19□□□□□ -0.62
CEACAM1-206ENST00000403136 IFNL4K9M1U5 179 aa11.19□□□□□ -0.62
CEACAM1-206ENST00000403136 LHBP01229 141 aa11.19□□□□□ -0.62
CEACAM1-206ENST00000403136 ADH4P08319 380 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms