RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 CEACAM5P06731 702 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 CD33P20138 364 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 UCP3P55916 312 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 ZNF141Q15928 474 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 SPATA45Q537H7 98 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 THEM4Q5T1C6 240 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 CLEC18CQ8NCF0 446 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 PSMF1Q92530 271 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 TMEM230Q96A57 120 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 PRRG4Q9BZD6 226 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 EGLN1Q9GZT9 426 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 MOB1AQ9H8S9 216 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 INSL6Q9Y581 213 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 MYO16Q9Y6X6 1858 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 TRBV6-7A0A0A0MS04 114 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 A0A1W2PNR3 127 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 ZNF253O75346 499 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 ABHD16AO95870 558 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 CRYAAP02489 173 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 IRF2P14316 349 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 FSTP19883 344 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 IL24Q13007 206 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 H1FOOQ8IZA3 346 aaPredicted RBP8.18□□□□□ -1.1
COL28A1-201ENST00000399429 LMX1AQ8TE12 382 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 MRGPRX3Q96LB0 322 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 PPIHO43447 177 aaKnown RBP8.18□□□□□ -1.1
COL28A1-201ENST00000399429 GYPAP02724 150 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 CT45A8P0DMV1 189 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 CT45A9P0DMV2 189 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 SUCLG1P53597 346 aaKnown RBP8.18□□□□□ -1.1
COL28A1-201ENST00000399429 CT45A2Q5DJT8 189 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 DEGS2Q6QHC5 323 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 ATOH7Q8N100 152 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 ABHD5Q8WTS1 349 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 ANAPC16Q96DE5 110 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 ULBP2Q9BZM5 246 aa8.18□□□□□ -1.1
COL28A1-201ENST00000399429 ZNF331Q9NQX6 463 aaPredicted RBP8.18□□□□□ -1.1
COL28A1-201ENST00000399429 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.17□□□□□ -1.1
COL28A1-201ENST00000399429 PAGE4O60829 102 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 MT-CO2P00403 227 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 GRB2P62993 217 aaKnown RBP8.17□□□□□ -1.1
COL28A1-201ENST00000399429 Q5PR19 223 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 OR4A47Q6IF82 309 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 DGAT2L6Q6ZPD8 337 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 MKXQ8IYA7 352 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 OR6X1Q8NH79 312 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 GPBAR1Q8TDU6 330 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 NEIL1Q96FI4 390 aaPredicted RBP8.17□□□□□ -1.1
COL28A1-201ENST00000399429 WDR81Q562E7 1941 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 FREM3P0C091 2139 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 PCNTO95613 3336 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 SHISA8B8ZZ34 492 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 RAC2P15153 192 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 FBLP22087 321 aaKnown RBP8.17□□□□□ -1.1
COL28A1-201ENST00000399429 BLKP51451 505 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 TDGF1P3P51864 188 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 GTF2H5Q6ZYL4 71 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 SLC24A4Q8NFF2 622 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 GJC3Q8NFK1 279 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 OR8B12Q8NGG6 310 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 NT5CQ8TCD5 201 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 R3HDM4Q96D70 268 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 ALKBH7Q9BT30 221 aaPredicted RBP8.17□□□□□ -1.1
COL28A1-201ENST00000399429 RBKSQ9H477 322 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 ENY2Q9NPA8 101 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 PLA2G3Q9NZ20 509 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 CABIN1Q9Y6J0 2220 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 ESPL1Q14674 2120 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 LRRC3CA6NJW4 275 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 MPPED1O15442 326 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 TCN2P20062 427 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 FFAR4Q5NUL3 377 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 ZNF774Q6NX45 483 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 TBC1D26Q86UD7 250 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 SLC35E1Q96K37 410 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 LOC101059948A0A1B0GTJ6 334 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 M0R135 149 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 HS3ST1O14792 307 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 PITX3O75364 302 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 ZNF17P17021 662 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 MDH2P40926 338 aaKnown RBP8.17□□□□□ -1.1
COL28A1-201ENST00000399429 IER3P46695 156 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 TRA2AQ13595 282 aaKnown RBP eCLIP8.17□□□□□ -1.1
COL28A1-201ENST00000399429 ZNF506Q5JVG8 444 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 C17orf99Q6UX52 265 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 OR10P1Q8NGE3 313 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 OR10G4Q8NGN3 311 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 OR10G9Q8NGN4 311 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 OR10G7Q8NGN6 311 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 UBALD1Q8TB05 177 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 ZNF799Q96GE5 643 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 AICDAQ9GZX7 198 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 OR51B6Q9H340 312 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 MANBALQ9NQG1 85 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 WASHC3Q9Y3C0 194 aa8.17□□□□□ -1.1
COL28A1-201ENST00000399429 XIRP1Q702N8 1843 aaKnown RBP8.16□□□□□ -1.1
COL28A1-201ENST00000399429 DOCK4Q8N1I0 1966 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 TRAPPC2LH3BP13 241 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 LDLRAD4O15165 306 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 LINC00614P0C842 121 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms