RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 SCGNO76038 276 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 TK1P04183 234 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 ELK1P19419 428 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 FUT3P21217 361 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 BLVRBP30043 206 aaPredicted RBP16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 ATAD3CQ5T2N8 411 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 RAB12Q6IQ22 244 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 TMEM185AQ8NFB2 350 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 OR4S1Q8NGB4 309 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 OR10R2Q8NGX6 335 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 RAB39BQ96DA2 213 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 DPCDQ9BVM2 203 aaPredicted RBP16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 REG4Q9BYZ8 158 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 ITGB1BP2Q9UKP3 347 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 HSF4Q9ULV5 492 aa16.18■□□□□ 0.18
MAP1LC3A-203ENST00000397709 RNF223E7ERA6 249 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 DVL1O14640 695 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 NDUFB3O43676 98 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 GLAP06280 429 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 IL2RGP31785 369 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 SEC61A1P61619 476 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 LOXL1Q08397 574 aaPredicted RBP16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 PAN3Q58A45 887 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 LRRC10Q5BKY1 277 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 PLAC9Q5JTB6 97 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 NKAPLQ5M9Q1 402 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 RTN4RL2Q86UN3 420 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 LAX1Q8IWV1 398 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 OR8H2Q8N162 312 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 FGFRL1Q8N441 504 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 PPP1R35Q8TAP8 253 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 S100A16Q96FQ6 103 aaKnown RBP16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 ARHGAP5-AS1Q96IT6 56 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 CYYR1Q96J86 154 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 NEDD4LQ96PU5 975 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 CHST6Q9GZX3 395 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 PPA2Q9H2U2 334 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 SLC25A10Q9UBX3 287 aaPredicted RBP16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 PEX16Q9Y5Y5 336 aa16.17■□□□□ 0.18
MAP1LC3A-203ENST00000397709 HSPB6O14558 160 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 RGS5O15539 181 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 CSN2P05814 226 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 CDK2P24941 298 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 KCNJ3P48549 501 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 NPY4RP50391 375 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 GRK1Q15835 563 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 WDR25Q64LD2 544 aaPredicted RBP16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 BRICD5Q6PL45 260 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 Q6ZTK2 550 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 C6orf201Q7Z4U5 140 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 RAB3CQ96E17 227 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 SULT4A1Q9BR01 284 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 PECRQ9BY49 303 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 PTTG2Q9NZH5 202 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 ADAM30Q9UKF2 790 aa16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 SETXQ7Z333 2677 aaKnown RBP16.16■□□□□ 0.18
MAP1LC3A-203ENST00000397709 CYSRT1A8MQ03 144 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 A8MXK9 166 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 MCRIP1C9JLW8 97 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 MFNGO00587 321 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 MGST3O14880 152 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 XRCC3O43542 346 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 CLPXO76031 633 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 HIST1H1DP16402 221 aaKnown RBP16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 PAX5Q02548 391 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 BPIFB2Q8N4F0 458 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 OR5D13Q8NGL4 314 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 WDFY2Q96P53 400 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 DIABLOQ9NR28 239 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 PLEKHJ1Q9NW61 149 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 CLN8Q9UBY8 286 aa16.15■□□□□ 0.18
MAP1LC3A-203ENST00000397709 MAP1AP78559 2803 aaPredicted RBP16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 FAM25AB3EWG3 89 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 FAM25CB3EWG5 89 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 FAM25GB3EWG6 89 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 GPR37O15354 613 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 HEXAP06865 529 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 NDUFB7P17568 137 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 GNB2P62879 340 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 RBM39Q14498 530 aaKnown RBP16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 ATXN7L3Q14CW9 347 aaPredicted RBP16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 ESCO2Q56NI9 601 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 OR4M1Q8NGD0 313 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 OR6Q1Q8NGQ2 317 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 PLPPR1Q8TBJ4 325 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 ST8SIA4Q92187 359 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 PHF21AQ96BD5 680 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 C1orf159Q96HA4 380 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 SSBP3Q9BWW4 388 aaPredicted RBP16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 KCNK7Q9Y2U2 307 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 CR1P17927 2039 aa16.14■□□□□ 0.17
MAP1LC3A-203ENST00000397709 KIAA1324LA8MWY0 1029 aaPredicted RBP16.13■□□□□ 0.17
MAP1LC3A-203ENST00000397709 FAM157AC9JC47 383 aa16.13■□□□□ 0.17
MAP1LC3A-203ENST00000397709 GNB3P16520 340 aa16.13■□□□□ 0.17
MAP1LC3A-203ENST00000397709 ERP29P30040 261 aaKnown RBP16.13■□□□□ 0.17
MAP1LC3A-203ENST00000397709 ARL6IP1Q15041 203 aa16.13■□□□□ 0.17
MAP1LC3A-203ENST00000397709 ZNF260Q3ZCT1 412 aa16.13■□□□□ 0.17
MAP1LC3A-203ENST00000397709 CNIH2Q6PI25 160 aa16.13■□□□□ 0.17
MAP1LC3A-203ENST00000397709 IZUMO1Q8IYV9 350 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms