RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 DNAJB11Q9UBS4 358 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 OR14J1Q9UGF5 321 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 ZNF222Q9UK12 451 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 EDARQ9UNE0 448 aa14.17□□□□□ -0.14
TSPAN4-205ENST00000397406 IGKV1D-17A0A075B6S4 117 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 OOEPA6NGQ2 149 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 SERPINE3A8MV23 424 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 H3BUI4 141 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 SLC33A1O00400 549 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 DEGS1O15121 323 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 LANCL1O43813 399 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 CA11O75493 328 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 UPK1BO75841 260 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 LY6HO94772 140 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 ZNF205O95201 554 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 TFF1P04155 84 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 IL7P13232 177 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 ZNF44P15621 663 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 MUC1P15941 1255 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 IFITM3Q01628 133 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 PNLIPRP3Q17RR3 467 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 HFEQ30201 348 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 RNASE12Q5GAN4 147 aaKnown RBP14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 SFRP4Q6FHJ7 346 aaPredicted RBP14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 OR8H2Q8N162 312 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 CD177Q8N6Q3 437 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 SUMF2Q8NBJ7 301 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 OR5T2Q8NGG2 359 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 ANGPTL6Q8NI99 470 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 GPX8Q8TED1 209 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 RDH5Q92781 318 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 CCL19Q99731 98 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 FAAP24Q9BTP7 215 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 GLS2Q9UI32 602 aa14.16□□□□□ -0.14
TSPAN4-205ENST00000397406 LGALS8O00214 317 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 SIRPB1O00241 398 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 SULT1C2O00338 296 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 SSX5O60225 188 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 NDUFS7O75251 213 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 F12P00748 615 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 GLAP06280 429 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 PRDX2P32119 198 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 DCTN2Q13561 401 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 MICBQ29980 383 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 STUMQ69YW2 141 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 ZFAND2BQ8WV99 257 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 NUDCD2Q8WVJ2 157 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 FCAMRQ8WWV6 532 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 THAP7Q9BT49 309 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 DPCDQ9BVM2 203 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 SCPEP1Q9HB40 452 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 AK3Q9UIJ7 227 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 METRNQ9UJH8 293 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 RBMX2Q9Y388 322 aaKnown RBP14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 USF3Q68DE3 2245 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 PPIAL4EA0A075B759 164 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 UBE2QL1A1L167 161 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 PPIAL4DF5H284 164 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 LPLP06858 475 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 CD3GP09693 182 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 PPIAL4FP0DN26 164 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 DAOP14920 347 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 FOSL1P15407 271 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 AMY2BP19961 511 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 GNG2P59768 71 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 Q5PR19 223 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 LRRC75A-AS1Q8N1F1 130 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 DYRK2Q92630 601 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 PALMDQ9NP74 551 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 ABCB10Q9NRK6 738 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 PPIAL4AQ9Y536 164 aa14.15□□□□□ -0.14
TSPAN4-205ENST00000397406 TRAV38-1A0A0B4J264 116 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 A0A1W2PQ09 198 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 MEIS3P1A6NDR6 274 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 MCRIP1C9JLW8 97 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 HSPB6O14558 160 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 PSPNO60542 156 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 EFNA4P52798 201 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 COL10A1Q03692 680 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 SHEQ5VZ18 495 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 STEAP3Q658P3 488 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 C16orf87Q6PH81 154 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 TRAPPC6BQ86SZ2 158 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 LYSMD2Q8IV50 215 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 BPIFB2Q8N4F0 458 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 DEFB108BQ8NET1 73 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 KLK11Q9UBX7 282 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 MTFP1Q9UDX5 166 aa14.14□□□□□ -0.15
TSPAN4-205ENST00000397406 TMEM82A0PJX8 343 aa14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 TNFRSF13BO14836 293 aaPredicted RBP14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 ORC5O43913 435 aa14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 FSTL3O95633 263 aa14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 GYPAP02724 150 aa14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 GDNFP39905 211 aa14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 ARFRP1Q13795 201 aa14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 RBM39Q14498 530 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 ZMYND11Q15326 602 aa14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 PAN3Q58A45 887 aaKnown RBP14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 ZNF788Q6ZQV5 615 aa14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 C17orf107Q6ZR85 190 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms