RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 AMY2BP19961 511 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 COL8A1P27658 744 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 SERPINF1P36955 418 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 TAS2R31P59538 309 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 TSPAN5P62079 268 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 ALKBH6Q3KRA9 238 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 C17orf107Q6ZR85 190 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 SAXO1Q8IYX7 474 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 OR5H2Q8NGV7 314 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 MITD1Q8WV92 249 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 PIGCQ92535 297 aa12.65□□□□□ -0.38
CAPN3-207ENST00000397200 FGF23Q9GZV9 251 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-207ENST00000397200 ROS1P08922 2347 aa12.65□□□□□ -0.39
CAPN3-207ENST00000397200 C9orf170A2RU37 121 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 HS3ST1O14792 307 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 CD8AP01732 235 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 HLA-AP01891 365 aaKnown RBP12.64□□□□□ -0.39
CAPN3-207ENST00000397200 S100A1P23297 94 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 DTYMKP23919 212 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 FPR2P25090 351 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 PMELP40967 661 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 SNU13P55769 128 aaKnown RBP12.64□□□□□ -0.39
CAPN3-207ENST00000397200 PPP1R1AQ13522 171 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 C6orf201Q7Z4U5 140 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 FBXL14Q8N1E6 418 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 OSR2Q8N2R0 312 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 TMEM185AQ8NFB2 350 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 OR8G5Q8NG78 346 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 OR5AP2Q8NGF4 316 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 HPSE2Q8WWQ2 592 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 PAPOLGQ9BWT3 736 aaKnown RBP12.64□□□□□ -0.39
CAPN3-207ENST00000397200 TAAR3PQ9P1P4 343 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 GPR160Q9UJ42 338 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 EDARQ9UNE0 448 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 GPR132Q9UNW8 380 aa12.64□□□□□ -0.39
CAPN3-207ENST00000397200 A0A1W2PPR1 153 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 ZNF850A8MQ14 1090 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 SLC22A5O76082 557 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 SIX6O95475 246 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 GABRR1P24046 479 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 TLE4Q04727 773 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 AADACL3Q5VUY0 350 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 TEX261Q6UWH6 196 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 OVCH2Q7RTZ1 564 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 CALHM1Q8IU99 346 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 MUC15Q8N387 334 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 OR13G1Q8NGZ3 307 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 CLEC4MQ9H2X3 399 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-207ENST00000397200 UBTD1Q9HAC8 227 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 PCDHB16Q9NRJ7 776 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 U3KQ87 197 aa12.63□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A10PA6NDY2 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A18PA6NE21 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A16PA6NEW6 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A20PA6NIJ5 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A8PA6NJQ4 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A7PA6NKC0 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 DBX1A6NMT0 343 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A22PA8MWA6 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A12PA8MX19 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A5PA8MXJ8 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A23PA8MXZ1 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 B9A039 149 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 LILRA1O75019 489 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 SFTPBP07988 381 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A15PP0C7V4 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A13PP0C7W8 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A14PP0C7W9 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 FAM90A24PP0C7X0 464 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 CXCL2P19875 107 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 CD34P28906 385 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 ZNF81P51508 661 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 RBM11P57052 281 aaKnown RBP12.62□□□□□ -0.39
CAPN3-207ENST00000397200 PRDX4Q13162 271 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 EFNB3Q15768 340 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 CEACAM21Q3KPI0 293 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 NHLRC3Q5JS37 347 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 ELP2Q6IA86 826 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 TMEM200AQ86VY9 491 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 TMEM17Q86X19 198 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 ZDHHC23Q8IYP9 409 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 ZNF611Q8N823 705 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 MARCH1Q8TCQ1 289 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 TMEM100Q9NV29 134 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 PLEKHJ1Q9NW61 149 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 MCRIP1C9JLW8 97 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 MPC2O95563 127 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 DUS4LO95620 317 aaKnown RBP12.62□□□□□ -0.39
CAPN3-207ENST00000397200 C4BPBP20851 252 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 CA6P23280 308 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 SURF2Q15527 256 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-207ENST00000397200 GRK1Q15835 563 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 TAF9Q16594 264 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 ADAD2Q8NCV1 583 aaKnown RBP12.62□□□□□ -0.39
CAPN3-207ENST00000397200 OR10AD1Q8NGE0 317 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 TMEM230Q96A57 120 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 SCGB3A2Q96PL1 93 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 PPA2Q9H2U2 334 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 C5orf66Q9H5L9 145 aa12.62□□□□□ -0.39
CAPN3-207ENST00000397200 MSL2Q9HCI7 577 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms