RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 A0A0G2JMM0 328 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 A0A0G2JRQ6 117 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 C3orf85A0A1B0GTC6 90 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 A0A1W2PPB8 328 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 A0A1W2PRS3 328 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 KIR3DP1A8MWS1 328 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 MPPED1O15442 326 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 PAX9P55771 341 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 KRTAP27-1Q3LI81 207 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 ZNF818PQ6ZRF7 136 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 TMEM252Q8N6L7 170 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 CALHM2Q9HA72 323 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 CRLF2Q9HC73 371 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 RPS10P46783 165 aaKnown RBP11.99□□□□□ -0.49
NUP98-204ENST00000397004 PCOLCEQ15113 449 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 OR2B11Q5JQS5 317 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 UNQ6494/PRO21346Q6UXR6 183 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 IGKV1-6A0A0C4DH72 117 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 SSSCA1O60232 199 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 B4GALT1P15291 398 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 CEBPGP53567 150 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 LGI3Q8N145 548 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 OSR2Q8N2R0 312 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 CADM4Q8NFZ8 388 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 ALKBH3Q96Q83 286 aaPredicted RBP11.99□□□□□ -0.49
NUP98-204ENST00000397004 ULBP2Q9BZM5 246 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 TMEM222Q9H0R3 208 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 OCIAD1Q9NX40 245 aa11.99□□□□□ -0.49
NUP98-204ENST00000397004 STRAPQ9Y3F4 350 aaKnown RBP11.99□□□□□ -0.49
NUP98-204ENST00000397004 IGHV5-10-1A0A0J9YXX1 117 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 HIST1H2BKO60814 126 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 HIST1H2BJP06899 126 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 SOD3P08294 240 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 SCTP09683 121 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 HIST1H2BOP23527 126 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 S100PP25815 95 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 HIST1H2BBP33778 126 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 HIST1H2BDP58876 126 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 HIST1H2BCP62807 126 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 HIST2H2BEQ16778 126 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 IZUMO4Q1ZYL8 232 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.98□□□□□ -0.49
NUP98-204ENST00000397004 TMEM217Q8N7C4 229 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 HIST1H2BHQ93079 126 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 SPSB1Q96BD6 273 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 HIST1H2BNQ99877 126 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 HIST1H2BMQ99879 126 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 TRDCB7Z8K6 153 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 EDN3P14138 238 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 ZNF32P17041 273 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 RBP2P50120 134 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 PSG4Q00888 419 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 RTL6Q6ICC9 239 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 MRPL14Q6P1L8 145 aaKnown RBP11.98□□□□□ -0.49
NUP98-204ENST00000397004 TBC1D26Q86UD7 250 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 SELENOHQ8IZQ5 122 aaKnown RBP11.98□□□□□ -0.49
NUP98-204ENST00000397004 SUMF2Q8NBJ7 301 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 OR5C1Q8NGR4 320 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 C10orf35Q96D05 121 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 DEFB126Q9BYW3 111 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 TMPRSS5Q9H3S3 457 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 NRASP01111 189 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 RAB5CP51148 216 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 DYNLT3P51808 116 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 DLK1P80370 383 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 KIAA0141Q14154 515 aaPredicted RBP11.98□□□□□ -0.49
NUP98-204ENST00000397004 PRDM13Q9H4Q3 707 aa11.98□□□□□ -0.49
NUP98-204ENST00000397004 hCG_38984A0A1B0GV85 526 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 OR6C6A6NF89 314 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 ADAM20O43506 726 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 LIFP15018 202 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 UCP3P55916 312 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 MRPS34P82930 218 aaKnown RBP11.97□□□□□ -0.49
NUP98-204ENST00000397004 ARL6IP1Q15041 203 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 EXT1Q16394 746 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 RAET1LQ5VY80 246 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 SSX7Q7RTT5 188 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 MYPOPQ86VE0 399 aaPredicted RBP11.97□□□□□ -0.49
NUP98-204ENST00000397004 ABHD5Q8WTS1 349 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 TOLLIPQ9H0E2 274 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 PHOX2AO14813 284 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 TLX3O43711 291 aaPredicted RBP11.97□□□□□ -0.49
NUP98-204ENST00000397004 LY86O95711 162 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 LCATP04180 440 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 CLDN15P56746 228 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 CCL7P80098 99 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 ZFP36L1Q07352 338 aaKnown RBP11.97□□□□□ -0.49
NUP98-204ENST00000397004 NMSQ5H8A3 153 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 RNF115Q9Y4L5 304 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 NPIPA2E9PIF3 369 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 NPIPA3F8WFD2 350 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 KLK3P07288 261 aaPredicted RBP11.97□□□□□ -0.49
NUP98-204ENST00000397004 UMODP07911 640 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 NDUFA6P56556 154 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 RBM11P57052 281 aaKnown RBP11.97□□□□□ -0.49
NUP98-204ENST00000397004 ZNF154Q13106 437 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 OR1F12Q8NHA8 337 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 TCTEX1D2Q8WW35 142 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 SH2D2AQ9NP31 389 aa11.97□□□□□ -0.49
NUP98-204ENST00000397004 LYRM2Q9NU23 88 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms