RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 ASAH1Q13510 395 aa12.65□□□□□ -0.38
PTPN20-206ENST00000395722 RBM39Q14498 530 aaKnown RBP12.65□□□□□ -0.38
PTPN20-206ENST00000395722 MICBQ29980 383 aa12.65□□□□□ -0.38
PTPN20-206ENST00000395722 PAN3Q58A45 887 aaKnown RBP12.65□□□□□ -0.38
PTPN20-206ENST00000395722 ATPAF1Q5TC12 328 aaPredicted RBP12.65□□□□□ -0.38
PTPN20-206ENST00000395722 SFRP4Q6FHJ7 346 aaPredicted RBP12.65□□□□□ -0.38
PTPN20-206ENST00000395722 GAPTQ8N292 157 aa12.65□□□□□ -0.38
PTPN20-206ENST00000395722 C19orf18Q8NEA5 215 aa12.65□□□□□ -0.38
PTPN20-206ENST00000395722 OR5T2Q8NGG2 359 aa12.65□□□□□ -0.38
PTPN20-206ENST00000395722 SETD6Q8TBK2 473 aa12.65□□□□□ -0.38
PTPN20-206ENST00000395722 SDSLQ96GA7 329 aa12.65□□□□□ -0.38
PTPN20-206ENST00000395722 METRNQ9UJH8 293 aa12.65□□□□□ -0.38
PTPN20-206ENST00000395722 PPIAL4AQ9Y536 164 aa12.65□□□□□ -0.38
PTPN20-206ENST00000395722 PSPNO60542 156 aa12.64□□□□□ -0.39
PTPN20-206ENST00000395722 NAPSAO96009 420 aa12.64□□□□□ -0.39
PTPN20-206ENST00000395722 TFF1P04155 84 aa12.64□□□□□ -0.39
PTPN20-206ENST00000395722 DTYMKP23919 212 aa12.64□□□□□ -0.39
PTPN20-206ENST00000395722 RCVRNP35243 200 aa12.64□□□□□ -0.39
PTPN20-206ENST00000395722 COL10A1Q03692 680 aa12.64□□□□□ -0.39
PTPN20-206ENST00000395722 C17orf107Q6ZR85 190 aa12.64□□□□□ -0.39
PTPN20-206ENST00000395722 DYRK2Q92630 601 aa12.64□□□□□ -0.39
PTPN20-206ENST00000395722 CMSS1Q9BQ75 279 aaKnown RBP12.64□□□□□ -0.39
PTPN20-206ENST00000395722 HDHD3Q9BSH5 251 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-206ENST00000395722 CHST6Q9GZX3 395 aa12.64□□□□□ -0.39
PTPN20-206ENST00000395722 TAS2R8Q9NYW2 309 aa12.64□□□□□ -0.39
PTPN20-206ENST00000395722 DOPEY2Q9Y3R5 2298 aa12.64□□□□□ -0.39
PTPN20-206ENST00000395722 TRBV6-6A0A0A6YYG2 114 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 TRAV38-1A0A0B4J264 116 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 MEIS3P1A6NDR6 274 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 LYNX1G3V0Z9 82 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 ZNF205O95201 554 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 F12P00748 615 aaPredicted RBP12.63□□□□□ -0.39
PTPN20-206ENST00000395722 GSTT2BP0CG30 244 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 LYNX1P0DP58 116 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 MDH2P40926 338 aaKnown RBP12.63□□□□□ -0.39
PTPN20-206ENST00000395722 OR3A1P47881 315 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 KCNJ3P48549 501 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 EFNA4P52798 201 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 PAX5Q02548 391 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 DYRK1AQ13627 763 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 Q6ZPA2 131 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 ZNF788Q6ZQV5 615 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 DCDC5Q6ZRR9 648 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 HOGA1Q86XE5 327 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 BPIFB2Q8N4F0 458 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 DEDD2Q8WXF8 326 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 SHARPINQ9H0F6 387 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 DNTTIP1Q9H147 329 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 C12orf4Q9NQ89 552 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 DCHS2Q6V1P9 2916 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 POM121CA8CG34 1229 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 ECDO95905 644 aaPredicted RBP12.63□□□□□ -0.39
PTPN20-206ENST00000395722 CSF1P09603 554 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 DAOP14920 347 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 ZMYND11Q15326 602 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 TOMM5Q8N4H5 51 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 GVQW1Q8N7I0 195 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 TMEM229BQ8NBD8 167 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 PLPPR1Q8TBJ4 325 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 GAFA1Q96PS6 74 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 RIMS4Q9H426 269 aaPredicted RBP12.63□□□□□ -0.39
PTPN20-206ENST00000395722 ETAA1Q9NY74 926 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 MAB21L2Q9Y586 359 aa12.63□□□□□ -0.39
PTPN20-206ENST00000395722 LRBAP50851 2863 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 USF3Q68DE3 2245 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 HSPB6O14558 160 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 LY6HO94772 140 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 CSN2P05814 226 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 FCGR3AP08637 254 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 AP3S2P59780 193 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 AKAP6Q13023 2319 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 ZNF57Q68EA5 555 aaPredicted RBP12.62□□□□□ -0.39
PTPN20-206ENST00000395722 ZNF497Q6ZNH5 498 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 DEFB108BQ8NET1 73 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 OR4S1Q8NGB4 309 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 SNAPC3Q92966 411 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 SNX22Q96L94 193 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 CCL19Q99731 98 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 PPA2Q9H2U2 334 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 TMEM165Q9HC07 324 aa12.62□□□□□ -0.39
PTPN20-206ENST00000395722 K7N7A8 449 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 NDUFS7O75251 213 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 IGHV2-70P01814 119 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 CD74P04233 296 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 SSTR2P30874 369 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 INPP1P49441 399 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 DEFA1P59665 94 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 DEFA3P59666 94 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 BTG1P62324 171 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 SRSF7Q16629 238 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTPN20-206ENST00000395722 ZNF880Q6PDB4 577 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 Q6ZS49 121 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 ZNF561Q8N587 486 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 MRPL30Q8TCC3 161 aaKnown RBP12.61□□□□□ -0.39
PTPN20-206ENST00000395722 NEK7Q8TDX7 302 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 C7orf50Q9BRJ6 194 aaKnown RBP12.61□□□□□ -0.39
PTPN20-206ENST00000395722 C11orf54Q9H0W9 315 aaPredicted RBP12.61□□□□□ -0.39
PTPN20-206ENST00000395722 ZNF665Q9H7R5 613 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 IFT46Q9NQC8 304 aa12.61□□□□□ -0.39
PTPN20-206ENST00000395722 ZNF701Q9NV72 531 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms