RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 FNDC4Q9H6D8 234 aaPredicted RBP4.18□□□□□ -1.74
AP3S1-202ENST00000395548 NIPAL2Q9H841 368 aa4.18□□□□□ -1.74
AP3S1-202ENST00000395548 NHEJ1Q9H9Q4 299 aaPredicted RBP4.18□□□□□ -1.74
AP3S1-202ENST00000395548 TREX1Q9NSU2 369 aa4.18□□□□□ -1.74
AP3S1-202ENST00000395548 TMEM106BQ9NUM4 274 aa4.18□□□□□ -1.74
AP3S1-202ENST00000395548 POFUT2Q9Y2G5 429 aa4.18□□□□□ -1.74
AP3S1-202ENST00000395548 KLK5Q9Y337 293 aaPredicted RBP4.18□□□□□ -1.74
AP3S1-202ENST00000395548 GMPPBQ9Y5P6 360 aa4.18□□□□□ -1.74
AP3S1-202ENST00000395548 SELENOKQ9Y6D0 94 aa4.18□□□□□ -1.74
AP3S1-202ENST00000395548 MYCBP2O75592 4640 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 IGLV3-9A0A075B6K5 115 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 A0A0A6YYD5 115 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 hCG_38984A0A1B0GV85 526 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 GOLGA8KD6RF30 607 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 H3BUX3 64 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 PLPP1O14494 284 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 RFXANKO14593 260 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 PHYHO14832 338 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 TM9SF1O15321 606 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 SYNGR1O43759 233 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 CHST1O43916 411 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 ATP5HO75947 161 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 NR2C1P13056 603 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 ZNF250P15622 560 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 PSMB6P28072 239 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 SLC6A1P30531 599 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 MYCNOSP40205 109 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 ID1P41134 155 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 SLC1A1P43005 524 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 TMEM50BP56557 158 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 BRWD1-AS2P59051 145 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 CRADDP78560 199 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 BASP1P80723 227 aaKnown RBP4.17□□□□□ -1.74
AP3S1-202ENST00000395548 RPL24P83731 157 aaKnown RBP4.17□□□□□ -1.74
AP3S1-202ENST00000395548 SRSF9Q13242 221 aaKnown RBP eCLIP4.17□□□□□ -1.74
AP3S1-202ENST00000395548 ARHGAP11BQ3KRB8 267 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 SLC22A6Q4U2R8 563 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 C1orf94Q6P1W5 598 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 APOOLQ6UXV4 268 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 AAED1Q7RTV5 226 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 MDP1Q86V88 176 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 ZNF283Q8N7M2 679 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 FAM76AQ8TAV0 307 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 PLPPR1Q8TBJ4 325 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 ZNF675Q8TD23 568 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 TCP10LQ8TDR4 215 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 GTF2H4Q92759 462 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 STMN2Q93045 179 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 AURKBQ96GD4 344 aaPredicted RBP4.17□□□□□ -1.74
AP3S1-202ENST00000395548 MAGEB18Q96M61 343 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 ZNF385AQ96PM9 386 aaKnown RBP4.17□□□□□ -1.74
AP3S1-202ENST00000395548 SHCBP1LQ9BZQ2 653 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 CSTL1Q9H114 145 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 OR51B5Q9H339 312 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 ZNF702PQ9H963 129 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 TAS2R13Q9NYV9 303 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 FBXL3Q9UKT7 428 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 OARD1Q9Y530 152 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 FLVCR1Q9Y5Y0 555 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 ZNF780BQ9Y6R6 833 aa4.17□□□□□ -1.74
AP3S1-202ENST00000395548 HMCN2Q8NDA2 5059 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 PKD1P98161 4303 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 hCG_1818297A0A087WSY0 165 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 IGLV9-49A0A0B4J1Y8 123 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 A0A1B0GW15 77 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 CENPXA8MT69 81 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 EPM2AB3EWF7 344 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 NDUFAB1O14561 156 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 ITGB1BP1O14713 200 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 EIF1BO60739 113 aaKnown RBP4.16□□□□□ -1.74
AP3S1-202ENST00000395548 FARS2O95363 451 aaKnown RBP4.16□□□□□ -1.74
AP3S1-202ENST00000395548 AHSA1O95433 338 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 H2AFZP0C0S5 128 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 HLA-DOBP13765 273 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 SAA4P35542 130 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 VDAC2P45880 294 aaPredicted RBP4.16□□□□□ -1.74
AP3S1-202ENST00000395548 GPX6P59796 221 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 RBBP4Q09028 425 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 LY6EQ16553 131 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 ZNF74Q16587 644 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 FAM27D1Q5T7N8 215 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 RNLSQ5VYX0 342 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 MED27Q6P2C8 311 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 H2AFVQ71UI9 128 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 SLC35D2Q76EJ3 337 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 KIRREL3Q8IZU9 778 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 ZNF781Q8N8C0 355 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 ZNF383Q8NA42 475 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 OR52E5Q8NH55 327 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 CDC26Q8NHZ8 85 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 ZNF519Q8TB69 540 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 MYDGFQ969H8 173 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 WDR34Q96EX3 536 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 OR5M11Q96RB7 305 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 ATP5SQ99766 215 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 ZNF649Q9BS31 505 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 SLC19A3Q9BZV2 496 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 SAV1Q9H4B6 383 aaPredicted RBP4.16□□□□□ -1.74
AP3S1-202ENST00000395548 CLEC5AQ9NY25 188 aa4.16□□□□□ -1.74
AP3S1-202ENST00000395548 EIF3KQ9UBQ5 218 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms