RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 A0A087WZY1 265 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 IGKV1-12A0A0C4DH73 117 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 BTBD17A6NE02 478 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 PROB1E7EW31 1015 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 IGKV1D-12P01611 117 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 CCNOP22674 350 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 GRB2P62993 217 aaKnown RBP12.4□□□□□ -0.42
CLIP2-203ENST00000395060 HIKESHIQ53FT3 197 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 HIST2H3PS2Q5TEC6 136 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 ZNF774Q6NX45 483 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 GALNT14Q96FL9 552 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 FAM210BQ96KR6 192 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 ZNF665Q9H7R5 613 aa12.4□□□□□ -0.42
CLIP2-203ENST00000395060 OR5H1A6NKK0 313 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 IFNL4K9M1U5 179 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 CD55P08174 381 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 MSR1P21757 451 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 PMELP40967 661 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 FAM189A2Q15884 450 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 GPR157Q5UAW9 335 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 ZNF468Q5VIY5 522 aaPredicted RBP12.4□□□□□ -0.43
CLIP2-203ENST00000395060 RAET1LQ5VY80 246 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 HIST3H2BBQ8N257 126 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 TMEM252Q8N6L7 170 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 SSC4DQ8WTU2 575 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 CPNE4Q96A23 557 aaPredicted RBP12.4□□□□□ -0.43
CLIP2-203ENST00000395060 MALSU1Q96EH3 234 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 TVP23CQ96ET8 276 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 THOC3Q96J01 351 aaKnown RBP12.4□□□□□ -0.43
CLIP2-203ENST00000395060 PACRGQ96M98 296 aaPredicted RBP12.4□□□□□ -0.43
CLIP2-203ENST00000395060 ATG101Q9BSB4 218 aa12.4□□□□□ -0.43
CLIP2-203ENST00000395060 C3orf85A0A1B0GTC6 90 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 NPBWR2P48146 333 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 Q6ZPA2 131 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 SYT13Q7L8C5 426 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 C18orf12Q96KH6 178 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 YPEL4Q96NS1 127 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 VSIRQ9H7M9 311 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 CALHM2Q9HA72 323 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 FOXD3Q9UJU5 478 aaPredicted RBP12.39□□□□□ -0.43
CLIP2-203ENST00000395060 GAB2Q9UQC2 676 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 EML6Q6ZMW3 1958 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 SEC14L6B5MCN3 397 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 CHST1O43916 411 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 DDTP30046 118 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 ZNF385CQ66K41 422 aaPredicted RBP12.39□□□□□ -0.43
CLIP2-203ENST00000395060 TBC1D26Q86UD7 250 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 STX12Q86Y82 276 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 GJC3Q8NFK1 279 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 MISP3Q96FF7 219 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 SYT3Q9BQG1 590 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 SLC7A10Q9NS82 523 aa12.39□□□□□ -0.43
CLIP2-203ENST00000395060 HIST1H1BP16401 226 aaKnown RBP12.38□□□□□ -0.43
CLIP2-203ENST00000395060 RBP2P50120 134 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 ENDOGQ14249 297 aaKnown RBP12.38□□□□□ -0.43
CLIP2-203ENST00000395060 C9orf135Q5VTT2 229 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 OR51H1Q8NH63 302 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 RNASE11Q8TAA1 199 aaKnown RBP12.38□□□□□ -0.43
CLIP2-203ENST00000395060 OXGR1Q96P68 337 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 ALKBH3Q96Q83 286 aaPredicted RBP12.38□□□□□ -0.43
CLIP2-203ENST00000395060 LRFN1Q9P244 771 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 NPIPA2E9PIF3 369 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 NPIPA3F8WFD2 350 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 TLX3O43711 291 aaPredicted RBP12.38□□□□□ -0.43
CLIP2-203ENST00000395060 B4GALT1P15291 398 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 CD200P41217 278 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 RPS16P62249 146 aaKnown RBP12.38□□□□□ -0.43
CLIP2-203ENST00000395060 ZNF266Q14584 549 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 IL13RA2Q14627 380 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 ANKRD37Q7Z713 158 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 DPPA2Q7Z7J5 298 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 TDHQ8IZJ6 230 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 OR6X1Q8NH79 312 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 TM2D1Q9BX74 207 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 PLA2G3Q9NZ20 509 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 IL36RNQ9UBH0 155 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 R4GN57 208 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 LRP4O75096 1905 aa12.38□□□□□ -0.43
CLIP2-203ENST00000395060 IGHV1OR21-1A0A087WYE8 117 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 HSPA12AO43301 675 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 IAPPP10997 89 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 APLNRP35414 380 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 ZNF133P52736 654 aaPredicted RBP12.37□□□□□ -0.43
CLIP2-203ENST00000395060 ELLP55199 621 aaPredicted RBP12.37□□□□□ -0.43
CLIP2-203ENST00000395060 UCP2P55851 309 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 PRR18Q8N4B5 295 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 ULBP2Q9BZM5 246 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 ZNF286AQ9HBT8 521 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 MPPED1O15442 326 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 PPYP01298 95 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 CCL1P22362 96 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 G0S2P27469 103 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 GAPTQ8N292 157 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 LFNGQ8NES3 379 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 OPA3Q9H6K4 179 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 TRAV39A0A0B4J263 110 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 A0A1W2PNV4 684 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 SMCO3A2RU48 225 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 LILRA5A6NI73 299 aa12.37□□□□□ -0.43
CLIP2-203ENST00000395060 MMP7P09237 267 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms