RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ALX3O95076 343 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 IL18BPO95998 194 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 PNLIPRP3Q17RR3 467 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 ABHD17AQ96GS6 310 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 OR10C1Q96KK4 312 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 CCL28Q9NRJ3 127 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 PTAFRP25105 342 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 RBM11P57052 281 aaKnown RBP13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 FAM27E3Q08E93 113 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 RBM39Q14498 530 aaKnown RBP13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 MRGPRDQ8TDS7 321 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 ADAMTS17Q8TE56 1095 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 Q96M66 194 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 MTCH1Q9NZJ7 389 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 DUS4LO95620 317 aaKnown RBP13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 CYCSP99999 105 aaKnown RBP13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 AESQ08117 197 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 OR8B8Q15620 311 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 MPPED2Q15777 294 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 H3F3CQ6NXT2 135 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 SUN5Q8TC36 379 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 GMPPAQ96IJ6 420 aaPredicted RBP13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 KCNMB2Q9Y691 235 aa13.66□□□□□ -0.22
SMARCD1-202ENST00000394963 ATF4P18848 351 aaPredicted RBP13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 PLEKHN1Q494U1 663 aaPredicted RBP13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 DPPA2Q7Z7J5 298 aa13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 HOGA1Q86XE5 327 aa13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 MARS2Q96GW9 593 aaKnown RBP13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 COL25A1Q9BXS0 654 aaPredicted RBP13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 V9GYS6 101 aa13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 CPN1P15169 458 aa13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 TCF15Q12870 199 aa13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 BTN1A1Q13410 526 aa13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 SPINK9Q5DT21 86 aa13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 SPICQ8N5J4 248 aa13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 OR6K3Q8NGY3 331 aa13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 OR5AC2Q9NZP5 309 aa13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 EPG5Q9HCE0 2579 aa13.65□□□□□ -0.22
SMARCD1-202ENST00000394963 RFPL4AA6NLU0 287 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 RFPL4AL1F8VTS6 287 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 OR2F2O95006 317 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 SFT2D2O95562 160 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 ZNF735P0CB33 412 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 WNT5AP41221 380 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 UCP2P55851 309 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 ZNF718Q3SXZ3 478 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 GGNBP1Q5YKI7 109 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 NSUN5P2Q63ZY6 315 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 MDS2Q8NDY4 140 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 PRSS33Q8NF86 280 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 ST8SIA2Q92186 375 aa13.65□□□□□ -0.23
SMARCD1-202ENST00000394963 MMP7P09237 267 aaPredicted RBP13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 FPR2P25090 351 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 CCDC71LQ8N9Z2 235 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 WBP1Q96G27 269 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 TAAR6Q96RI8 345 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 SLC2A9Q9NRM0 540 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 LOC390937A0A1W2PQ73 354 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 LDLRAD4O15165 306 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 SSSCA1O60232 199 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 ZBTB25P24278 435 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 MPV17P39210 176 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 SSBP1Q04837 148 aaKnown RBP13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 GAPTQ8N292 157 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 SUMF2Q8NBJ7 301 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 ZNF391Q9UJN7 358 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 SPEF1Q9Y4P9 236 aa13.64□□□□□ -0.23
SMARCD1-202ENST00000394963 SLC51BQ86UW2 128 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 ZDHHC22Q8N966 263 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 TMEM127O75204 238 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 EIF3GO75821 320 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 PDGFAP04085 211 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 PET100P0DJ07 73 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 BTNL3Q6UXE8 466 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 POM121L2Q96KW2 1035 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 GPR132Q9UNW8 380 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 MED6O75586 246 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 IAPPP10997 89 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 OR3A1P47881 315 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 ZNF816Q0VGE8 651 aaPredicted RBP13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 CEACAM21Q3KPI0 293 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 SIGIRRQ6IA17 410 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 RGS7BPQ6MZT1 257 aaPredicted RBP13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 KLF14Q8TD94 323 aaPredicted RBP13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 MITD1Q8WV92 249 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 WNT2BQ93097 391 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 PTX4Q96A99 478 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 MED30Q96HR3 178 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 GLS2Q9UI32 602 aa13.63□□□□□ -0.23
SMARCD1-202ENST00000394963 A0A1W2PPE3 182 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 H3BUI4 141 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 RRP8O43159 456 aaKnown RBP13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 KRASP01116 189 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 PPYP01298 95 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 TOR2AQ5JU69 321 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 ACOT7LQ6ZUV0 252 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 RNF138Q8WVD3 245 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 ARPC5LQ9BPX5 153 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 FANCFQ9NPI8 374 aa13.62□□□□□ -0.23
SMARCD1-202ENST00000394963 ASCL3Q9NQ33 180 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms