RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 RAP2BP61225 183 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 TMEM128Q5BJH2 165 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 LY6G6FQ5SQ64 297 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 ALKBH2Q6NS38 261 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 DHRS11Q6UWP2 260 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 C9orf62Q8N4C0 152 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 POC1AQ8NBT0 407 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 TMEM171Q8WVE6 324 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 ZNF2Q9BSG1 426 aaPredicted RBP12.67□□□□□ -0.38
CCT4-201ENST00000394440 OPN4Q9UHM6 478 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 SPEF1Q9Y4P9 236 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 PLCE1Q9P212 2302 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 IGLV3-9A0A075B6K5 115 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 MCRIP1C9JLW8 97 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 ATP6V1G2-DDX39BF2Z307 99 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 GOSR2O14653 212 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 GRPP07492 148 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 DNASE1P24855 282 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 ECI1P42126 302 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 ZNF146Q15072 292 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 DCAF12L2Q5VW00 463 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 LRP11Q86VZ4 500 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 WDR13Q9H1Z4 485 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 Q9N2K0 584 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 SPTA1P02549 2419 aa12.67□□□□□ -0.38
CCT4-201ENST00000394440 TRBV6-6A0A0A6YYG2 114 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 SLC22A5O76082 557 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 PPP3CBP16298 524 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 CD40P25942 277 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 IL13RA1P78552 427 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 BAMBIQ13145 260 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 RND1Q92730 232 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 CHIAQ9BZP6 476 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 MEMO1Q9Y316 297 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 IGHV3-64DA0A0J9YX35 117 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 FAM172BPA6NC97 362 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 RGS13O14921 159 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 SIX6O95475 246 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 DUS4LO95620 317 aaKnown RBP12.66□□□□□ -0.38
CCT4-201ENST00000394440 PTBP3O95758 552 aaKnown RBP12.66□□□□□ -0.38
CCT4-201ENST00000394440 AKR1C4P17516 323 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 HLA-GP17693 338 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 CD34P28906 385 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 UXS1Q8NBZ7 420 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 ASB13Q8WXK3 278 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 DHRS9Q9BPW9 319 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 DPCDQ9BVM2 203 aaPredicted RBP12.66□□□□□ -0.38
CCT4-201ENST00000394440 PRORYQ9H606 182 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 MGAT4AQ9UM21 535 aa12.66□□□□□ -0.38
CCT4-201ENST00000394440 HSPB6O14558 160 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 GSTT2P0CG29 244 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 RPS2P15880 293 aaKnown RBP12.65□□□□□ -0.38
CCT4-201ENST00000394440 SUPT4H1P63272 117 aaKnown RBP12.65□□□□□ -0.38
CCT4-201ENST00000394440 SPIN3Q5JUX0 258 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 PRAMEF6Q5VXH4 476 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 WDR82Q6UXN9 313 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 ST6GALNAC3Q8NDV1 305 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 OR5M8Q8NGP6 311 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 MRPL30Q8TCC3 161 aaKnown RBP12.65□□□□□ -0.38
CCT4-201ENST00000394440 RIMS4Q9H426 269 aaPredicted RBP12.65□□□□□ -0.38
CCT4-201ENST00000394440 DBX1A6NMT0 343 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 NXPH2O95156 264 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 THBDP07204 575 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 PI3P19957 117 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 CD200P41217 278 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 CA7P43166 264 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 SRSF4Q08170 494 aaKnown RBP12.65□□□□□ -0.38
CCT4-201ENST00000394440 RBM39Q14498 530 aaKnown RBP12.65□□□□□ -0.38
CCT4-201ENST00000394440 SHEQ5VZ18 495 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 ZNF880Q6PDB4 577 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 ZNF826PQ6ZT77 177 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 RDH5Q92781 318 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 TMEM246Q9BRR3 403 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 FXYD6Q9H0Q3 95 aa12.65□□□□□ -0.38
CCT4-201ENST00000394440 CHMP1AQ9HD42 196 aaPredicted RBP12.65□□□□□ -0.38
CCT4-201ENST00000394440 SFT2D2O95562 160 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 OR2H2O95918 312 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 ZNF44P15621 663 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 VAMP1P23763 118 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 KLF3P57682 345 aaPredicted RBP12.64□□□□□ -0.39
CCT4-201ENST00000394440 RPS23P62266 143 aaKnown RBP12.64□□□□□ -0.39
CCT4-201ENST00000394440 LPCAT3Q6P1A2 487 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 SSX8Q7RTT4 187 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 NEK7Q8TDX7 302 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 TREM2Q9NZC2 230 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 SLC23A1Q9UHI7 598 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 ZSCAN5BA6NJL1 495 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 SLC33A1O00400 549 aaPredicted RBP12.64□□□□□ -0.39
CCT4-201ENST00000394440 HS3ST1O14792 307 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 DEGS1O15121 323 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 CTSDP07339 412 aaPredicted RBP12.64□□□□□ -0.39
CCT4-201ENST00000394440 GLRA1P23415 457 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 C20orf204Q6ZNR8 217 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 GAPTQ8N292 157 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 NUP37Q8NFH4 326 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 PHB2Q99623 299 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 DUSP13Q9UII6 198 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 ATRXP46100 2492 aa12.64□□□□□ -0.39
CCT4-201ENST00000394440 TRGV8A0A0C4DH27 118 aa12.63□□□□□ -0.39
CCT4-201ENST00000394440 RGS11O94810 467 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms