RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 H2AFB2P0C5Z0 115 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 RAB25P57735 213 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 FAM209AQ5JX71 171 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 Q8TCH9 128 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 FLVCR2Q9UPI3 526 aa17.1■□□□□ 0.33
HDDC3-202ENST00000394272 DISC1C4P0D8 188 aa17.09■□□□□ 0.33
HDDC3-202ENST00000394272 C19orf84I3L1E1 186 aa17.09■□□□□ 0.33
HDDC3-202ENST00000394272 IGFBP2P18065 325 aa17.09■□□□□ 0.33
HDDC3-202ENST00000394272 LMO1P25800 156 aa17.09■□□□□ 0.33
HDDC3-202ENST00000394272 TAS2R46P59540 309 aa17.09■□□□□ 0.33
HDDC3-202ENST00000394272 RBM39Q14498 530 aaKnown RBP17.09■□□□□ 0.33
HDDC3-202ENST00000394272 ZCCHC24Q8N2G6 241 aaKnown RBP17.09■□□□□ 0.33
HDDC3-202ENST00000394272 OR5AP2Q8NGF4 316 aa17.09■□□□□ 0.33
HDDC3-202ENST00000394272 SIRPB1O00241 398 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 CSN2P05814 226 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 ZMYND11Q15326 602 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 TESK1Q15569 626 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 SWI5Q1ZZU3 235 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 SHEQ5VZ18 495 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 IDO2Q6ZQW0 420 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 FAM90A1Q86YD7 464 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 OR13C8Q8NGS7 320 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 OR5H2Q8NGV7 314 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 PRRT1Q99946 306 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 GINS4Q9BRT9 223 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 OR14J1Q9UGF5 321 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 ANXA10Q9UJ72 324 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 SCP2D1Q9UJQ7 156 aa17.08■□□□□ 0.33
HDDC3-202ENST00000394272 PFDN1O60925 122 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 CEBPDP49716 269 aaPredicted RBP17.07■□□□□ 0.32
HDDC3-202ENST00000394272 CCL8P80075 99 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 AGAP6Q5VW22 663 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 NEK7Q8TDX7 302 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 ETAA1Q9NY74 926 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 TREM2Q9NZC2 230 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 GLS2Q9UI32 602 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 NPTNQ9Y639 398 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 DHFRP00374 187 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 TNFRSF1AP19438 455 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 CARTPTQ16568 116 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 SRSF7Q16629 238 aaKnown RBP eCLIP17.07■□□□□ 0.32
HDDC3-202ENST00000394272 PAN3Q58A45 887 aaKnown RBP17.07■□□□□ 0.32
HDDC3-202ENST00000394272 Q6ZS49 121 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 OVCH2Q7RTZ1 564 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 ARRDC1Q8N5I2 433 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 SLC25A21Q9BQT8 299 aaPredicted RBP17.07■□□□□ 0.32
HDDC3-202ENST00000394272 MS4A5Q9H3V2 200 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 RIMS4Q9H426 269 aaPredicted RBP17.07■□□□□ 0.32
HDDC3-202ENST00000394272 RNF7Q9UBF6 113 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 ALG5Q9Y673 324 aa17.07■□□□□ 0.32
HDDC3-202ENST00000394272 DOPEY1Q5JWR5 2465 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 TRBV6-6A0A0A6YYG2 114 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 RFPL4AA6NLU0 287 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 RFPL4AL1F8VTS6 287 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 IFNL4K9M1U5 179 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 ARPC1BO15143 372 aaKnown RBP17.06■□□□□ 0.32
HDDC3-202ENST00000394272 PEX14O75381 377 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 IFNA6P05013 189 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 MECP2P51608 486 aaKnown RBP17.06■□□□□ 0.32
HDDC3-202ENST00000394272 CHRFAM7AQ494W8 412 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 SCGB2B2Q4G0G5 96 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 MUC15Q8N387 334 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 FAM222BQ8WU58 562 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 CHAC2Q8WUX2 184 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 MRGPRFQ96AM1 343 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 DYNLRB1Q9NP97 96 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 DSCAMO60469 2012 aa17.06■□□□□ 0.32
HDDC3-202ENST00000394272 PYCARD-AS1I3L0S3 204 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 MDH2P40926 338 aaKnown RBP17.05■□□□□ 0.32
HDDC3-202ENST00000394272 OR3A3P47888 321 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 GAPTQ8N292 157 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 MRPL30Q8TCC3 161 aaKnown RBP17.05■□□□□ 0.32
HDDC3-202ENST00000394272 SEBOXQ9HB31 216 aaPredicted RBP17.05■□□□□ 0.32
HDDC3-202ENST00000394272 ZNF286AQ9HBT8 521 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 TMEM165Q9HC07 324 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 CHMP1AQ9HD42 196 aaPredicted RBP17.05■□□□□ 0.32
HDDC3-202ENST00000394272 Q9N2K0 584 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 PPP1R3CQ9UQK1 317 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 FLNCQ14315 2725 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 TANC2Q9HCD6 1990 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 C7orf66A4D0T2 115 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 PSPNO60542 156 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 PSG2P11465 335 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 CDK10Q15131 360 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 NEURL2Q9BR09 285 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 EGLN1Q9GZT9 426 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 PPA2Q9H2U2 334 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 SAP30LQ9HAJ7 183 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 EHFQ9NZC4 300 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 WIPI2Q9Y4P8 454 aa17.05■□□□□ 0.32
HDDC3-202ENST00000394272 HRNRQ86YZ3 2850 aaPredicted RBP17.05■□□□□ 0.32
HDDC3-202ENST00000394272 USP9XQ93008 2570 aaPredicted RBP17.05■□□□□ 0.32
HDDC3-202ENST00000394272 ZNF880Q6PDB4 577 aa17.04■□□□□ 0.32
HDDC3-202ENST00000394272 C20orf204Q6ZNR8 217 aa17.04■□□□□ 0.32
HDDC3-202ENST00000394272 OR11L1Q8NGX0 322 aa17.04■□□□□ 0.32
HDDC3-202ENST00000394272 PLPPR1Q8TBJ4 325 aa17.04■□□□□ 0.32
HDDC3-202ENST00000394272 GIMAP1Q8WWP7 306 aa17.04■□□□□ 0.32
HDDC3-202ENST00000394272 KMT2BQ9UMN6 2715 aaPredicted RBP17.03■□□□□ 0.32
HDDC3-202ENST00000394272 IGKV1D-17A0A075B6S4 117 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 OR2AT4A6NND4 320 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms