RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 J3QRE1 110 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 SIRPB1O00241 398 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 IGKV1D-12P01611 117 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 LPLP06858 475 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 ZNF20P17024 532 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 MNDAP41218 407 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 PTGFRP43088 359 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 GLIPR1P48060 266 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 AESQ08117 197 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 EGFEM1PQ0D2K5 195 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 KPNB1Q14974 876 aaKnown RBP13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 TP53I3Q53FA7 332 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 VAX1Q5SQQ9 334 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 TPTE2P1Q5T6R2 138 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 CCDC121Q6ZUS5 278 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 OSR2Q8N2R0 312 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 OR4D6Q8NGJ1 314 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 GPR61Q9BZJ8 451 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 OR6C3Q9NZP0 311 aa13.93□□□□□ -0.18
SNRPA1-202ENST00000394082 FAM90A18PA6NE21 464 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 FAM90A16PA6NEW6 464 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 FAM90A20PA6NIJ5 464 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 FAM90A9PA6NNJ1 464 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 FAM90A12PA8MX19 464 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 FAM90A5PA8MXJ8 464 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 TOR1AO14656 332 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 SLC16A6O15403 523 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 MPIG6BO95866 241 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 FAM90A15PP0C7V4 464 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 FAM90A13PP0C7W8 464 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 FAM90A14PP0C7W9 464 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 FAM90A24PP0C7X0 464 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 FAM106CPP0CH98 169 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 CD24P25063 80 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 SLC6A1P30531 599 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 Q6P435 159 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 BAIAP2L2Q6UXY1 529 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 LINC00574Q9H8X3 128 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 ZNF286AQ9HBT8 521 aa13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 KMT2CQ8NEZ4 4911 aaKnown RBP13.92□□□□□ -0.18
SNRPA1-202ENST00000394082 K7EIL1 84 aa13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 SLC33A1O00400 549 aaPredicted RBP13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 OCM2P0CE71 109 aa13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 OCMP0CE72 109 aaPredicted RBP13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 CGB3P0DN86 165 aa13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 CGB7P0DN87 165 aa13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 DBTP11182 482 aaKnown RBP13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 NANOS3P60323 173 aaKnown RBP13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 PAX5Q02548 391 aa13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 KRBOX4Q5JUW0 171 aa13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 AMIGO2Q86SJ2 522 aa13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 OR9G1Q8NH87 305 aa13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 CENPNQ96H22 339 aaPredicted RBP13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 COQ2Q96H96 371 aa13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 MYCBPQ99417 103 aaPredicted RBP13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 INPP5EQ9NRR6 644 aa13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 KIAA2026Q5HYC2 2103 aa13.91□□□□□ -0.18
SNRPA1-202ENST00000394082 KBTBD11-OT1A0A1B0GTJ5 212 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 HTR1AP08908 422 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 CALCBP10092 127 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 ZNF44P15621 663 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 GDNFP39905 211 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 SNU13P55769 128 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 C17orf58Q2M2W7 97 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 MEDAGQ5VYS4 303 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 LINC00482Q8N8I6 264 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 ZNF565Q8N9K5 539 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 OR51T1Q8NGJ9 327 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 HRASLS5Q96KN8 279 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 RIBC2Q9H4K1 309 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 ZCCHC4Q9H5U6 513 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 OAZ3Q9UMX2 235 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 MOB4Q9Y3A3 225 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 AMMECR1Q9Y4X0 333 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 HSPE1-MOB4S4R3N1 261 aa13.9□□□□□ -0.18
SNRPA1-202ENST00000394082 NBEAL2Q6ZNJ1 2754 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 DAPL1A0PJW8 107 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 OR4C45A6NMZ5 311 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 SNRPGP62308 76 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 CDK5R1Q15078 307 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 ELP2Q6IA86 826 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 SLC16A12Q6ZSM3 486 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 ACBD7Q8N6N7 88 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 OR51D1Q8NGF3 324 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 OR51A4Q8NGJ6 313 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 OR13C3Q8NGS6 347 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 RFT1Q96AA3 541 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 MRPL48Q96GC5 212 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 KIRREL1Q96J84 757 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 IMPAD1Q9NX62 359 aa13.89□□□□□ -0.19
SNRPA1-202ENST00000394082 SNTNA6NMZ2 147 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 DEGS1O15121 323 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 FGF16O43320 207 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 MTNR1BP49286 362 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 ZP1P60852 638 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 ALKBH1Q13686 389 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 KISS1Q15726 138 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 C1orf146Q5VVC0 180 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 SERPINA12Q8IW75 414 aa13.88□□□□□ -0.19
SNRPA1-202ENST00000394082 PARP16Q8N5Y8 322 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms