RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 DAOP14920 347 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 TRA2AQ13595 282 aaKnown RBP eCLIP16.23■□□□□ 0.192e-6■■■■■ 27.7
CBX1-202ENST00000393408 WIPI1Q5MNZ9 446 aaPredicted RBP16.23■□□□□ 0.19
CBX1-202ENST00000393408 Q6ZS49 121 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 DPPA2Q7Z7J5 298 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 ZNF561Q8N587 486 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 ISOC2Q96AB3 205 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 TMEM56Q96MV1 263 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 SLC7A10Q9NS82 523 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 TMEM56-RWDD3S4R434 201 aa16.23■□□□□ 0.19
CBX1-202ENST00000393408 TGIF1Q15583 401 aa16.22■□□□□ 0.19
CBX1-202ENST00000393408 CPEB3Q8NE35 698 aaKnown RBP16.22■□□□□ 0.19
CBX1-202ENST00000393408 LFNGQ8NES3 379 aa16.22■□□□□ 0.19
CBX1-202ENST00000393408 EXTL1Q92935 676 aa16.22■□□□□ 0.19
CBX1-202ENST00000393408 PRDM14Q9GZV8 571 aa16.22■□□□□ 0.19
CBX1-202ENST00000393408 FAM86C1Q9NVL1 165 aa16.22■□□□□ 0.19
CBX1-202ENST00000393408 IGSF23A1L1A6 192 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 Q0VFX4 171 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 EIF2S3LQ2VIR3 472 aaKnown RBP16.21■□□□□ 0.19
CBX1-202ENST00000393408 TBC1D26Q86UD7 250 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A10PA6NDY2 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A18PA6NE21 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A16PA6NEW6 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A20PA6NIJ5 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A8PA6NJQ4 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A7PA6NKC0 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A22PA8MWA6 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A12PA8MX19 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A5PA8MXJ8 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A23PA8MXZ1 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 UBE2CO00762 179 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A15PP0C7V4 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A13PP0C7W8 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A14PP0C7W9 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 FAM90A24PP0C7X0 464 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 NKX2-1P43699 371 aaPredicted RBP16.21■□□□□ 0.19
CBX1-202ENST00000393408 RHEBQ15382 184 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 COLCA1Q6ZS62 124 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 ABHD3Q8WU67 409 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 KCNJ16Q9NPI9 418 aa16.21■□□□□ 0.19
CBX1-202ENST00000393408 UBE2J1Q9Y385 318 aaPredicted RBP16.21■□□□□ 0.19
CBX1-202ENST00000393408 CYTIPO60759 359 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 PITX3O75364 302 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 TRAPPC6AO75865 159 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 RND3P61587 244 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 POLR2GP62487 172 aaKnown RBP eCLIP16.2■□□□□ 0.18
CBX1-202ENST00000393408 CLINT1Q14677 625 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 KRBOX4Q5JUW0 171 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 C5orf24Q7Z6I8 188 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 SELENOHQ8IZQ5 122 aaKnown RBP16.2■□□□□ 0.18
CBX1-202ENST00000393408 SUMF1Q8NBK3 374 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 OR1J1Q8NGS3 322 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 Q9N2K0 584 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 RFNGQ9Y644 331 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 A0A1B0GV50 99 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 PRSS44E7EML9 344 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 YKT6O15498 198 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 CFIP05156 583 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 BCL3P20749 454 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 SULT1A1P50225 295 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 ZNF266Q14584 549 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 PPP1R32Q7Z5V6 425 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 ZNF695Q8IW36 515 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 CD300LFQ8TDQ1 290 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 ZNF845Q96IR2 970 aaPredicted RBP16.2■□□□□ 0.18
CBX1-202ENST00000393408 DEPPQ9NTK1 212 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 ATPIF1Q9UII2 106 aa16.2■□□□□ 0.18
CBX1-202ENST00000393408 A0A1W2PPE3 182 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 NAPSAO96009 420 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 S100A6P06703 90 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 RAB5AP20339 215 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 ATP6V0CP27449 155 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 SRSF7Q16629 238 aaKnown RBP eCLIP16.19■□□□□ 0.18
CBX1-202ENST00000393408 SPIN2AQ99865 258 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 SPIN2BQ9BPZ2 258 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 FGF23Q9GZV9 251 aaPredicted RBP16.19■□□□□ 0.18
CBX1-202ENST00000393408 ZNF724A8MTY0 619 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 OR13C7P0DN81 318 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 SPIN3Q5JUX0 258 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 ZNF818PQ6ZRF7 136 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 WDR5BQ86VZ2 330 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 OR2G3Q8NGZ4 309 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 SLAMF9Q96A28 289 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 PLEKHF2Q9H8W4 249 aa16.19■□□□□ 0.18
CBX1-202ENST00000393408 LYRM2Q9NU23 88 aaPredicted RBP16.19■□□□□ 0.18
CBX1-202ENST00000393408 hCG_1809904A0A1W2PP81 198 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 A0A1W2PR64 198 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 A0A1W2PRV1 198 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 IGHV3-9P01782 118 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 IGHEP01854 428 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 TK1P04183 234 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 RPS18P62269 152 aaKnown RBP16.18■□□□□ 0.18
CBX1-202ENST00000393408 SLC23A3Q6PIS1 610 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 OR56B2PQ8NGI1 322 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 TMEM171Q8WVE6 324 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 CPNE4Q96A23 557 aaPredicted RBP16.18■□□□□ 0.18
CBX1-202ENST00000393408 TMEM45BQ96B21 275 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 ABHD14BQ96IU4 210 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 RARRES2Q99969 163 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 PAPOLGQ9BWT3 736 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms