RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 HSPA13P48723 471 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 MTNR1BP49286 362 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 UBE2E1P51965 193 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 P2RX3P56373 397 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 RPS25P62851 125 aaKnown RBP6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 SLC22A6Q4U2R8 563 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 ACSM3Q53FZ2 586 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 PLA1AQ53H76 456 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 UTF1Q5T230 341 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 PRAMEF5Q5TYX0 476 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 RNLSQ5VYX0 342 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 NCR3LG1Q68D85 454 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 LHFPL4Q7Z7J7 247 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 TRAPPC6BQ86SZ2 158 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 PXT1Q8NFP0 134 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 OR4D6Q8NGJ1 314 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 OR5D13Q8NGL4 314 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 ZFAND2BQ8WV99 257 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 GCDHQ92947 438 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 SLC25A28Q96A46 364 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 COQ2Q96H96 371 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 AJUBAQ96IF1 538 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 ZNF714Q96N38 554 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 KCNK15Q9H427 330 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 GLS2Q9UI32 602 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 RAB26Q9ULW5 256 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 FAM96BQ9Y3D0 163 aa6.25□□□□□ -1.41
HMGB3P1-201ENST00000393368 TRAV39A0A0B4J263 110 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 A0A1W2PPH5 198 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 hADV38S2A0JD32 116 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 TMEM89A2RUT3 159 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 FAM181BA6NEQ2 426 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 MGST3O14880 152 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 GEMIN2O14893 280 aaKnown RBP6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 GPX5O75715 221 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 PAHP00439 452 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 ARG1P05089 322 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 IGHV1-8P0DP01 117 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 JUNBP17275 347 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 LMO1P25800 156 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 IER3P46695 156 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 BPIFB3P59826 476 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 BDH1Q02338 343 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 ACSM1Q08AH1 577 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 TAF9Q16594 264 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 PAN3Q58A45 887 aaKnown RBP6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 AWAT1Q58HT5 328 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 KRBOX4Q5JUW0 171 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 RBM48Q5RL73 367 aaKnown RBP6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 LDLRAD2Q5SZI1 272 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 ELP2Q6IA86 826 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 GLIPR1L1Q6UWM5 242 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 C12orf54Q6X4T0 127 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 ASCL4Q6XD76 172 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 C1orf122Q6ZSJ8 110 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 PRSS48Q7RTY5 328 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 CEACAM19Q7Z692 300 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 DYNAPQ8N1N2 210 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 PLPPR1Q8TBJ4 325 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 UFD1Q92890 307 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 FAM46BQ96A09 425 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 CPNE2Q96FN4 548 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 DMRTB1Q96MA1 342 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 METTL9Q9H1A3 318 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 PRDM13Q9H4Q3 707 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 UNKLQ9H9P5 680 aaKnown RBP6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 ZNRD1Q9P1U0 126 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 ST3GAL6Q9Y274 331 aa6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 MRPS28Q9Y2Q9 187 aaKnown RBP6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 SF3B6Q9Y3B4 125 aaKnown RBP6.24□□□□□ -1.41
HMGB3P1-201ENST00000393368 ODAMA1E959 279 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 CLDN34H7C241 214 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 ST8SIA5O15466 376 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 CLPXO76031 633 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 OR7C1O76099 320 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 CSTBP04080 98 aaKnown RBP6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 CD1AP06126 327 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 FBP1P09467 338 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 HKR1P10072 659 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 MDKP21741 143 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 CDK2P24941 298 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 GLP1RP43220 463 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 RBM11P57052 281 aaKnown RBP6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 RELBQ01201 579 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 MEF2CQ06413 473 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 DYNC1I2Q13409 638 aaKnown RBP6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 IL13RA2Q14627 380 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 LY6EQ16553 131 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 LTC4SQ16873 150 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 AWAT2Q6E213 333 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 OR10K2Q6IF99 312 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 C16orf87Q6PH81 154 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 UNQ9370/PRO34162Q6UXP9 181 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 TMEM91Q6ZNR0 172 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 LRRTM1Q86UE6 522 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 RTN4RL2Q86UN3 420 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 LYPD6Q86Y78 171 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 LDLRAD3Q86YD5 345 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 OSR2Q8N2R0 312 aa6.23□□□□□ -1.41
HMGB3P1-201ENST00000393368 SUMF2Q8NBJ7 301 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms