RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 VSIG4Q9Y279 399 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 LINC01553A4QN01 128 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 CFDP00746 253 aaPredicted RBP13.16□□□□□ -0.3
CCDC50-201ENST00000392455 METRNLQ641Q3 311 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 SIGIRRQ6IA17 410 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 DOCK2Q92608 1830 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 NRXN3Q9Y4C0 1643 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 TMEM202A6NGA9 273 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 PLPP1O14494 284 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 MGPP08493 103 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 NAT2P11245 290 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 NPPBP16860 134 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 PLPPR5Q32ZL2 321 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 RTN4RL1Q86UN2 441 aaPredicted RBP13.16□□□□□ -0.3
CCDC50-201ENST00000392455 OR2C3Q8N628 320 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 SLC16A11Q8NCK7 471 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 OR5M11Q96RB7 305 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 CRISPLD2Q9H0B8 497 aa13.16□□□□□ -0.3
CCDC50-201ENST00000392455 C7orf72A4D263 438 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 CD3DP04234 171 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 PRSS8Q16651 343 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 SEZ6L2Q6UXD5 910 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 NRAPQ86VF7 1730 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 A0A1B0GVG6 124 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 SLC35B1P78383 322 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 OR2Z1Q8NG97 314 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 ZAR1LA6NP61 321 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 TNFSF11O14788 317 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 P2RY1P47900 373 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 CLPPQ16740 277 aaPredicted RBP13.15□□□□□ -0.3
CCDC50-201ENST00000392455 TMEM215Q68D42 235 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 WDFY1Q8IWB7 410 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 ZNF502Q8TBZ5 544 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 MRGPRX3Q96LB0 322 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 INSM1Q01101 510 aaPredicted RBP13.15□□□□□ -0.3
CCDC50-201ENST00000392455 ADAMTS17Q8TE56 1095 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 TJP1Q07157 1748 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 H0Y8X5 98 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 CST7O76096 145 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 POLR2IP36954 125 aaKnown RBP13.15□□□□□ -0.3
CCDC50-201ENST00000392455 DGCR2P98153 550 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 C10orf128Q5T292 105 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 PPIHO43447 177 aaKnown RBP13.15□□□□□ -0.3
CCDC50-201ENST00000392455 TCL1AP56279 114 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 GABRA6Q16445 453 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 FGF20Q9NP95 211 aaPredicted RBP13.15□□□□□ -0.3
CCDC50-201ENST00000392455 PGPEP1Q9NXJ5 209 aa13.15□□□□□ -0.3
CCDC50-201ENST00000392455 POLR2AP24928 1970 aaKnown RBP13.15□□□□□ -0.3
CCDC50-201ENST00000392455 DIRC3C9JPN6 131 aa13.15□□□□□ -0.31
CCDC50-201ENST00000392455 MAS1LP35410 378 aa13.15□□□□□ -0.31
CCDC50-201ENST00000392455 SLC25A1P53007 311 aa13.15□□□□□ -0.31
CCDC50-201ENST00000392455 WDR25Q64LD2 544 aaPredicted RBP13.15□□□□□ -0.31
CCDC50-201ENST00000392455 BCORP1Q8N888 145 aa13.15□□□□□ -0.31
CCDC50-201ENST00000392455 NSUN5P2Q63ZY6 315 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 TCF23Q7RTU1 214 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 LYG1Q8N1E2 194 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 VN1R17PQ8TDU5 208 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 A4GNTQ9UNA3 340 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 C3orf85A0A1B0GTC6 90 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 KLKB1P03952 638 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 GFRALQ6UXV0 394 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 OR10J6PQ8NGY7 276 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 C6orf106Q9H6K1 298 aaPredicted RBP13.14□□□□□ -0.31
CCDC50-201ENST00000392455 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.14□□□□□ -0.31
CCDC50-201ENST00000392455 A0A1W2PQM1 296 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 RAB33BQ9H082 229 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 GEMIN7Q9H840 131 aaKnown RBP13.14□□□□□ -0.31
CCDC50-201ENST00000392455 TBC1D29Q9UFV1 150 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 TMEM33P57088 247 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 FAM71F2Q6NXP2 309 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 COL16A1Q07092 1604 aaPredicted RBP13.14□□□□□ -0.31
CCDC50-201ENST00000392455 SDF2Q99470 211 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 SYT11Q9BT88 431 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 OR2D2Q9H210 308 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 OR51B4Q9Y5P0 310 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 KLF3P57682 345 aaPredicted RBP13.14□□□□□ -0.31
CCDC50-201ENST00000392455 RPL18Q07020 188 aaKnown RBP13.14□□□□□ -0.31
CCDC50-201ENST00000392455 DNLZQ5SXM8 178 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 WFDC5Q8TCV5 224 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 ACER3Q9NUN7 267 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 SIRT5Q9NXA8 310 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 COA4Q9NYJ1 87 aa13.14□□□□□ -0.31
CCDC50-201ENST00000392455 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 RNASE1P07998 156 aaKnown RBP13.13□□□□□ -0.31
CCDC50-201ENST00000392455 SKP2Q13309 424 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 C10orf113Q5VZT2 155 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 DOK1Q99704 481 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 NEURL2Q9BR09 285 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 SERTM1A2A2V5 107 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 NGFP01138 241 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 IL4P05112 153 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 MEF2CQ06413 473 aaPredicted RBP13.13□□□□□ -0.31
CCDC50-201ENST00000392455 GNRHR2Q96P88 292 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 CXCL16Q9H2A7 254 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 A0A096LPE4 126 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 IGHV3-15A0A0B4J1V0 119 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 A0A1W2PPZ6 126 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 FAM157CP0CG43 387 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 TSPOP30536 169 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 MPV17LQ2QL34 196 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms