RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 OR2A4O95047 310 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 PNRC1Q12796 327 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 DMKNQ6E0U4 476 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 DHRS7BQ6IAN0 325 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 C11orf87Q6NUJ2 197 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 PET117Q6UWS5 81 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 CXorf67Q86X51 503 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 OR2A7Q96R45 310 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 TMEM204Q9BSN7 226 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 ZNF552Q9H707 407 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 SLC7A10Q9NS82 523 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 MYH14Q7Z406 1995 aaKnown RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 UBE2L5PA0A1B0GUS4 154 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 SHISA8B8ZZ34 492 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 RPL36A-HNRNPH2H7BZ11 118 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 CCSO14618 274 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 SYNGR1O43759 233 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 CTAG2O75638 210 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 MMP7P09237 267 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 HOXB3P14651 431 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 PMELP40967 661 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 HERVK_113P61574 105 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 KIAA0141Q14154 515 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 HLXQ14774 488 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 CBLN3Q6UW01 205 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 C9orf40Q8IXQ3 194 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 SRRQ9GZT4 340 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 ADAMTS7Q9UKP4 1686 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 NME2P1O60361 137 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 RPS27P42677 84 aaKnown RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 FFAR4Q5NUL3 377 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 TMED6Q8WW62 240 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 ABHD14BQ96IU4 210 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 GPR27Q9NS67 375 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 CACNG5Q9UF02 275 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 OR2W1Q9Y3N9 320 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 SDK1Q7Z5N4 2213 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 SYNGR2O43760 224 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 DXOO77932 396 aaKnown RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 MMP9P14780 707 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 EBLN2Q6P2I7 272 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 PRSS54Q6PEW0 395 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 MDP1Q86V88 176 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 OR2C3Q8N628 320 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 PPP1R1CQ8WVI7 109 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 HARBI1Q96MB7 349 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 NOL4LQ96MY1 436 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 ISG20L2Q9H9L3 353 aaKnown RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 IGHV3-64DA0A0J9YX35 117 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 SYNGR3O43761 229 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 HPRT1P00492 218 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 INHBBP09529 407 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 GNG4P50150 75 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 BAMBIQ13145 260 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 NRN1LQ496H8 165 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 RFESDQ8TAC1 157 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 SAT2Q96F10 170 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 SEC11CQ9BY50 192 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 KCNK15Q9H427 330 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 C20orf141Q9NUB4 165 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 CISD1Q9NZ45 108 aaKnown RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 TINAGQ9UJW2 476 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 ING1Q9UK53 422 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-201ENST00000380701 AKAP11Q9UKA4 1901 aa6.29□□□□□ -1.4
CCDC171-201ENST00000380701 TRBV23-1A0A0A0MS06 115 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 A0A1W2PNV4 684 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 F5H697 171 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 MAGEB4O15481 346 aaPredicted RBP6.28□□□□□ -1.4
CCDC171-201ENST00000380701 MPDU1O75352 247 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 HSBP1O75506 76 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 NXPH3O95157 252 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 SIX6O95475 246 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 PDGFAP04085 211 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 PPP1CCP36873 323 aaKnown RBP6.28□□□□□ -1.4
CCDC171-201ENST00000380701 ERVFC1-1P60608 527 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 FABP9Q0Z7S8 132 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 CD226Q15762 336 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 FAM106AQ4KMX7 169 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 LINC00470Q9BZP3 86 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 SLC2A9Q9NRM0 540 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 PILRAQ9UKJ1 303 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 CITO14578 2027 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 POM121CA8CG34 1229 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 FOSL1P15407 271 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 HIST1H1BP16401 226 aaKnown RBP6.28□□□□□ -1.4
CCDC171-201ENST00000380701 LIMK1P53667 647 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 UCP2P55851 309 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 TPPP2P59282 170 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 PDZK1IP1Q13113 114 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 RIGQ13278 110 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 MMDQ15546 238 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 CEACAM21Q3KPI0 293 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 FAM74A3Q4VXF1 159 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 MESTQ5EB52 335 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 DNM1P46Q6ZS02 220 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 MSRB3Q8IXL7 192 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 BATF2Q8N1L9 274 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 MUC15Q8N387 334 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 FADS6Q8N9I5 356 aa6.28□□□□□ -1.4
CCDC171-201ENST00000380701 ZFP62Q8NB50 900 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms