RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 NDUFA2O43678 99 aa10.6□□□□□ -0.71
VRK3-202ENST00000377011 SFT2D2O95562 160 aa10.6□□□□□ -0.71
VRK3-202ENST00000377011 MPIG6BO95866 241 aa10.6□□□□□ -0.71
VRK3-202ENST00000377011 ARF1P84077 181 aaKnown RBP10.6□□□□□ -0.71
VRK3-202ENST00000377011 PABPC1L2AQ5JQF8 200 aa10.6□□□□□ -0.71
VRK3-202ENST00000377011 OR10Z1Q8NGY1 313 aa10.6□□□□□ -0.71
VRK3-202ENST00000377011 OR14K1Q8NGZ2 314 aa10.6□□□□□ -0.71
VRK3-202ENST00000377011 PP6455Q8WZ26 134 aa10.6□□□□□ -0.71
VRK3-202ENST00000377011 BCL2L2Q92843 193 aaPredicted RBP10.6□□□□□ -0.71
VRK3-202ENST00000377011 CRLF2Q9HC73 371 aa10.6□□□□□ -0.71
VRK3-202ENST00000377011 GPR35Q9HC97 309 aa10.6□□□□□ -0.71
VRK3-202ENST00000377011 CHMP1AQ9HD42 196 aaPredicted RBP10.6□□□□□ -0.71
VRK3-202ENST00000377011 ASH2LQ9UBL3 628 aa10.6□□□□□ -0.71
VRK3-202ENST00000377011 A0A0A6YYD4 124 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 CCSO14618 274 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 FGF16O43320 207 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 SOD3P08294 240 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 HCKP08631 526 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 CELA3BP08861 270 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 QDPRP09417 244 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 NAT2P11245 290 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 TPT1P13693 172 aaKnown RBP10.59□□□□□ -0.71
VRK3-202ENST00000377011 VAMP1P23763 118 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 HIST1H3AP68431 136 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 MICBQ29980 383 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 CEACAM16Q2WEN9 425 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 PLAC9Q5JTB6 97 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 HIST2H3PS2Q5TEC6 136 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 HIST2H3AQ71DI3 136 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 LHFPL1Q86WI0 220 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 COMMD2Q86X83 199 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 C20orf196Q8IYI0 205 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 ZNF283Q8N7M2 679 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 WFDC11Q8NEX6 87 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 OR5H2Q8NGV7 314 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 FGFBP3Q8TAT2 258 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 TMEM54Q969K7 222 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 TM2D1Q9BX74 207 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 NKX6-2Q9C056 277 aaPredicted RBP10.59□□□□□ -0.71
VRK3-202ENST00000377011 MS4A7Q9GZW8 240 aaPredicted RBP10.59□□□□□ -0.71
VRK3-202ENST00000377011 WDR13Q9H1Z4 485 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 OR10A2Q9H208 303 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 CXXC4Q9H2H0 198 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 FN3KRPQ9HA64 309 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 MBD2Q9UBB5 411 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 PURGQ9UJV8 347 aaKnown RBP10.59□□□□□ -0.71
VRK3-202ENST00000377011 V9GYS6 101 aa10.59□□□□□ -0.71
VRK3-202ENST00000377011 FOXI3A8MTJ6 420 aaPredicted RBP10.58□□□□□ -0.72
VRK3-202ENST00000377011 SERPINE3A8MV23 424 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 M0R1B8 84 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 PMP2P02689 132 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 H2AFB1P0C5Y9 115 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 PET100P0DJ07 73 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 AKR1C4P17516 323 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 MSR1P21757 451 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 GUCA1AP43080 201 aaPredicted RBP10.58□□□□□ -0.72
VRK3-202ENST00000377011 OR3A4PP47883 348 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 DEFB113Q30KQ7 82 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 SLC16A14Q7RTX9 510 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 ADAD2Q8NCV1 583 aaKnown RBP10.58□□□□□ -0.72
VRK3-202ENST00000377011 SLC30A7Q8NEW0 376 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 GJC3Q8NFK1 279 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 BPIFCQ8NFQ6 507 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 MARCH1Q8TCQ1 289 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 SEC22AQ96IW7 307 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 NICN1Q9BSH3 213 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 LINC00470Q9BZP3 86 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 C5orf51A6NDU8 294 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 DHRS7CA6NNS2 312 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 E7EQL1 145 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 ZNF587BE7ETH6 402 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 F5H0A9 414 aaPredicted RBP10.58□□□□□ -0.72
VRK3-202ENST00000377011 HS3ST1O14792 307 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 RER1O15258 196 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 ATG12O94817 140 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 PATE4P0C8F1 98 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 CD40P25942 277 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 SERPINF1P36955 418 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 CSNK1A1P48729 337 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 TMEM50BP56557 158 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 DEFA5Q01523 94 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 GFOD2Q3B7J2 385 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 SLC22A6Q4U2R8 563 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 FAM57BQ71RH2 274 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 KCTD9Q7L273 389 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 SVBPQ8N300 66 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 TMEM104Q8NE00 496 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 OR5AP2Q8NGF4 316 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 CASTOR1Q8WTX7 329 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 NINJ1Q92982 152 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 PGAM5Q96HS1 289 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 FAM71F1Q96KD3 344 aaPredicted RBP10.58□□□□□ -0.72
VRK3-202ENST00000377011 GPER1Q99527 375 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 FOXC2Q99958 501 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 TMEM100Q9NV29 134 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 DNAJB11Q9UBS4 358 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 RNF115Q9Y4L5 304 aa10.58□□□□□ -0.72
VRK3-202ENST00000377011 NIPBLQ6KC79 2804 aaeCLIP10.57□□□□□ -0.72
VRK3-202ENST00000377011 TLN2Q9Y4G6 2542 aa10.57□□□□□ -0.72
VRK3-202ENST00000377011 IGHV1-18A0A0C4DH31 117 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms