RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CCNOP22674 350 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 SRPXP78539 464 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 PPP1R32Q7Z5V6 425 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 KDF1Q8NAX2 398 aaPredicted RBP12.53□□□□□ -0.4
MSH5-201ENST00000375703 MAFAQ8NHW3 353 aaPredicted RBP12.53□□□□□ -0.4
MSH5-201ENST00000375703 FAM213BQ8TBF2 198 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 CPNE4Q96A23 557 aaPredicted RBP12.53□□□□□ -0.4
MSH5-201ENST00000375703 POM121Q96HA1 1249 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 PBDC1Q9BVG4 233 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 PRDM14Q9GZV8 571 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 DEPPQ9NTK1 212 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 FBXO7Q9Y3I1 522 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 KIAA1549Q9HCM3 1950 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 CCDC163A0A0D9SF12 145 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 A0A1B0GV50 99 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 MT-ND4LP03901 98 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 BCL3P20749 454 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 NKX2-1P43699 371 aaPredicted RBP12.53□□□□□ -0.4
MSH5-201ENST00000375703 MEOX2P50222 304 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 RNF212Q495C1 297 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 ACER2Q5QJU3 275 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 C5orf24Q7Z6I8 188 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 TBC1D26Q86UD7 250 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 WDR5BQ86VZ2 330 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 SUMF1Q8NBK3 374 aa12.53□□□□□ -0.4
MSH5-201ENST00000375703 UMAD1C9J7I0 102 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 F10P00742 488 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 DAOP14920 347 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 POLR2GP62487 172 aaKnown RBP eCLIP12.52□□□□□ -0.41
MSH5-201ENST00000375703 ZNF565Q8N9K5 539 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 SLAMF9Q96A28 289 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 PAPOLGQ9BWT3 736 aaKnown RBP12.52□□□□□ -0.41
MSH5-201ENST00000375703 SLC35B3Q9H1N7 401 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 TUBA4BQ9H853 241 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 KCNJ16Q9NPI9 418 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 NOSIPQ9Y314 301 aaKnown RBP12.52□□□□□ -0.41
MSH5-201ENST00000375703 MRPL33O75394 65 aaKnown RBP12.52□□□□□ -0.41
MSH5-201ENST00000375703 TK1P04183 234 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 CLINT1Q14677 625 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 TRIM61Q5EBN2 209 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 ZNF561Q8N587 486 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 Q8NFD4 153 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 OR56B2PQ8NGI1 322 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 CD300LFQ8TDQ1 290 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 ISOC2Q96AB3 205 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 TMEM56Q96MV1 263 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 TCFL5Q9UL49 500 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 TMEM56-RWDD3S4R434 201 aa12.52□□□□□ -0.41
MSH5-201ENST00000375703 ZNHIT1O43257 154 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 LMO1P25800 156 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 HAAOP46952 286 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 CYB561P49447 251 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 KRBOX4Q5JUW0 171 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 SLC23A3Q6PIS1 610 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 COLCA1Q6ZS62 124 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 SELENOHQ8IZQ5 122 aaKnown RBP12.51□□□□□ -0.41
MSH5-201ENST00000375703 LILRB2Q8N423 598 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 C11orf1Q9H5F2 150 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 Q9N2K0 584 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 MRPS18CQ9Y3D5 142 aaKnown RBP12.51□□□□□ -0.41
MSH5-201ENST00000375703 SHANK1Q9Y566 2161 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 PINLYPA6NC86 204 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A10PA6NDY2 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A18PA6NE21 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A16PA6NEW6 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A20PA6NIJ5 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A8PA6NJQ4 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A7PA6NKC0 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A22PA8MWA6 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A12PA8MX19 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A5PA8MXJ8 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A23PA8MXZ1 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 EIF3GO75821 320 aaKnown RBP eCLIP12.51□□□□□ -0.41
MSH5-201ENST00000375703 S100A6P06703 90 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 SCTP09683 121 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A15PP0C7V4 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A13PP0C7W8 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A14PP0C7W9 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 FAM90A24PP0C7X0 464 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 OR13C7P0DN81 318 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 OMGP23515 440 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 PPP1CCP36873 323 aaKnown RBP12.51□□□□□ -0.41
MSH5-201ENST00000375703 PRDX4Q13162 271 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 ZNF266Q14584 549 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 C9orf135Q5VTT2 229 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 ZNF818PQ6ZRF7 136 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 OR2G3Q8NGZ4 309 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 SPIN2AQ99865 258 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 SPIN2BQ9BPZ2 258 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 REPIN1Q9BWE0 567 aaKnown RBP12.51□□□□□ -0.41
MSH5-201ENST00000375703 PLEKHF2Q9H8W4 249 aa12.51□□□□□ -0.41
MSH5-201ENST00000375703 A0A096LPE4 126 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 A0A1W2PPZ6 126 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 IGSF23A1L1A6 192 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 K7N7A8 449 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 CCL2P13500 99 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 HOXA6P31267 233 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 GPM6AP51674 278 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 GFRA1P56159 465 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 ARF1P84077 181 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms