RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 PGA3P0DJD8 388 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 NTF3P20783 257 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 GNG10P50151 68 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 SNAI3Q3KNW1 292 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 TDHQ8IZJ6 230 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 FAM210BQ96KR6 192 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 TMED3Q9Y3Q3 217 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 A0A1W2PNV4 684 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 H3BQ15 152 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 SMIM10L1P0DMW3 83 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 FSTP19883 344 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 FHITP49789 147 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 KRTDAPP60985 99 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 PLPPR5Q32ZL2 321 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 LINC01590Q5TEZ4 76 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 SMIM10Q96HG1 83 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 OR2H1Q9GZK4 316 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 CCL28Q9NRJ3 127 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 SLC2A9Q9NRM0 540 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 AURKAIP1Q9NWT8 199 aaPredicted RBP5.73□□□□□ -1.49
SMC1A-202ENST00000375340 CHST1O43916 411 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 PSG2P11465 335 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 SELEP16581 610 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 OR2M3Q8NG83 312 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 SPSB1Q96BD6 273 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF385AQ96PM9 386 aaKnown RBP5.73□□□□□ -1.49
SMC1A-202ENST00000375340 RASL10BQ96S79 203 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 POMT1Q9Y6A1 747 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 TGIF2-C20orf24A0A0A6YYL0 155 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 ADAM11O75078 769 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 PDGFBP01127 241 aaPredicted RBP5.73□□□□□ -1.49
SMC1A-202ENST00000375340 PINX1Q96BK5 328 aaKnown RBP5.73□□□□□ -1.49
SMC1A-202ENST00000375340 GPX7Q96SL4 187 aaPredicted RBP5.73□□□□□ -1.49
SMC1A-202ENST00000375340 SOSTQ9BQB4 213 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 SHARPINQ9H0F6 387 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 FAM58AQ8N1B3 248 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 PPP1R35Q8TAP8 253 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 IGHV5-10-1A0A0J9YXX1 117 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 LYPD3O95274 346 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 CRYAAP02489 173 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 GP1BAP07359 652 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 CD63P08962 238 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 ISXQ2M1V0 245 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 Q3ZCU0 254 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 SIGLECL1Q8N7X8 197 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 C22orf15Q8WYQ4 148 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 APOBEC3DQ96AK3 386 aaPredicted RBP5.73□□□□□ -1.49
SMC1A-202ENST00000375340 GALMQ96C23 342 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 MSL2Q9HCI7 577 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 PIPOXQ9P0Z9 390 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 VSTM5A8MXK1 200 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 PDCD6O75340 191 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 MBPP02686 304 aaPredicted RBP5.73□□□□□ -1.49
SMC1A-202ENST00000375340 RUNX1Q01196 453 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 ABHD3Q8WU67 409 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 PARP11Q9NR21 331 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 TMEM11P17152 192 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 PPP1CBP62140 327 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 SLC10A1Q14973 349 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 FAM78BQ5VT40 261 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 LIAT1Q6ZQX7 453 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 DEFB108BQ8NET1 73 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 OR10AD1Q8NGE0 317 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 PARD6AQ9NPB6 346 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 TREM2Q9NZC2 230 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 LHFPL6Q9Y693 200 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 TRAV14DV4A0A0A6YYC5 116 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 MFNGO00587 321 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF658BQ4V348 819 aaPredicted RBP5.73□□□□□ -1.49
SMC1A-202ENST00000375340 BTNL8Q6UX41 500 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 MYPOPQ86VE0 399 aaPredicted RBP5.73□□□□□ -1.49
SMC1A-202ENST00000375340 TECTBQ96PL2 329 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 TAAR9Q96RI9 348 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 NRIP2Q9BQI9 281 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF251Q9BRH9 671 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 PSG11Q9UQ72 335 aa5.73□□□□□ -1.49
SMC1A-202ENST00000375340 TSPAN2O60636 221 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 FCGR3AP08637 254 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 PRR27Q6MZM9 219 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF66Q6ZN08 573 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 DBX2Q6ZNG2 339 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 ZDHHC11Q9H8X9 412 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 GPR27Q9NS67 375 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 MIOXQ9UGB7 285 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF107Q9UII5 783 aaPredicted RBP5.72□□□□□ -1.49
SMC1A-202ENST00000375340 NCOR1O75376 2440 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 COX5AP20674 150 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 FABP6P51161 128 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF439Q8NDP4 499 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 MRGPRDQ8TDS7 321 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 AGFG2O95081 481 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 PMCHP20382 165 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 G6PCP35575 357 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 MEOX1P50221 254 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 ETV3LQ6ZN32 361 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 PACRGQ96M98 296 aaPredicted RBP5.72□□□□□ -1.49
SMC1A-202ENST00000375340 TLNRD1Q9H1K6 362 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 RAB9BQ9NP90 201 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 MPTX1A8MV57 137 aa5.72□□□□□ -1.49
SMC1A-202ENST00000375340 PITX3O75364 302 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms