RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 NRN1LQ496H8 165 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 AKIRIN2Q53H80 203 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 WIPI1Q5MNZ9 446 aaPredicted RBP10.97□□□□□ -0.65
CTPS1-202ENST00000372621 SLC25A26Q70HW3 274 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 DEPPQ9NTK1 212 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 MRPS18CQ9Y3D5 142 aaKnown RBP10.97□□□□□ -0.65
CTPS1-202ENST00000372621 TNRC6AQ8NDV7 1962 aaKnown RBP10.97□□□□□ -0.65
CTPS1-202ENST00000372621 CCDC163A0A0D9SF12 145 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 RND3P61587 244 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 SNRPEP62304 92 aaKnown RBP10.97□□□□□ -0.65
CTPS1-202ENST00000372621 SRPXP78539 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 GNMTQ14749 295 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 MEX3BQ6ZN04 569 aaKnown RBP10.97□□□□□ -0.65
CTPS1-202ENST00000372621 PPP1R32Q7Z5V6 425 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 OR2C3Q8N628 320 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 ABHD3Q8WU67 409 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FGF23Q9GZV9 251 aaPredicted RBP10.97□□□□□ -0.65
CTPS1-202ENST00000372621 SLC7A10Q9NS82 523 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 PARPBPQ9NWS1 579 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 NAPSAO96009 420 aa10.96□□□□□ -0.65
CTPS1-202ENST00000372621 SNRNP70P08621 437 aaKnown RBP10.96□□□□□ -0.65
CTPS1-202ENST00000372621 ACAA1P09110 424 aaPredicted RBP10.96□□□□□ -0.65
CTPS1-202ENST00000372621 HOXB1P14653 301 aaPredicted RBP10.96□□□□□ -0.65
CTPS1-202ENST00000372621 HOXA6P31267 233 aa10.96□□□□□ -0.65
CTPS1-202ENST00000372621 GFRA1P56159 465 aa10.96□□□□□ -0.65
CTPS1-202ENST00000372621 SLC35B3Q9H1N7 401 aa10.96□□□□□ -0.65
CTPS1-202ENST00000372621 Q9N2K0 584 aa10.96□□□□□ -0.65
CTPS1-202ENST00000372621 COL27A1Q8IZC6 1860 aaPredicted RBP10.96□□□□□ -0.65
CTPS1-202ENST00000372621 IGSF23A1L1A6 192 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 UBE2CO00762 179 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 PPP1CCP36873 323 aaKnown RBP10.96□□□□□ -0.66
CTPS1-202ENST00000372621 B2MP61769 119 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 SP5Q6BEB4 398 aaPredicted RBP10.96□□□□□ -0.66
CTPS1-202ENST00000372621 TMEM182Q6ZP80 229 aaPredicted RBP10.96□□□□□ -0.66
CTPS1-202ENST00000372621 TBC1D26Q86UD7 250 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 ODF3L1Q8IXM7 274 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 SELENOHQ8IZQ5 122 aaKnown RBP10.96□□□□□ -0.66
CTPS1-202ENST00000372621 EXTL1Q92935 676 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 TMEM45BQ96B21 275 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 ZNF845Q96IR2 970 aaPredicted RBP10.96□□□□□ -0.66
CTPS1-202ENST00000372621 ATPIF1Q9UII2 106 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 CLEC18AA5D8T8 446 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 FAM24AA6NFZ4 105 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 C1orf196B1AJZ1 125 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 UMAD1C9J7I0 102 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 PRH1P02810 166 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 ASCL1P50553 236 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 S100A12P80511 92 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 SLC23A3Q6PIS1 610 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 C5orf24Q7Z6I8 188 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 DPPA2Q7Z7J5 298 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 BATF2Q8N1L9 274 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 CLEC18CQ8NCF0 446 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 CPNE4Q96A23 557 aaPredicted RBP10.96□□□□□ -0.66
CTPS1-202ENST00000372621 IFT22Q9H7X7 185 aa10.96□□□□□ -0.66
CTPS1-202ENST00000372621 MED19A0JLT2 244 aaPredicted RBP10.95□□□□□ -0.66
CTPS1-202ENST00000372621 PINLYPA6NC86 204 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 PITX3O75364 302 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 BCL3P20749 454 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 HERPUD1Q15011 391 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 RHEBQ15382 184 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 TGIF1Q15583 401 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 ZNF818PQ6ZRF7 136 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 ZNF561Q8N587 486 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 LFNGQ8NES3 379 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 LILRB1Q8NHL6 650 aaPredicted RBP10.95□□□□□ -0.66
CTPS1-202ENST00000372621 TMEM171Q8WVE6 324 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 HLA-CQ95604 372 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 ISOC2Q96AB3 205 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 HS3ST6Q96QI5 342 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 PBDC1Q9BVG4 233 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 REPIN1Q9BWE0 567 aaKnown RBP10.95□□□□□ -0.66
CTPS1-202ENST00000372621 LYRM2Q9NU23 88 aaPredicted RBP10.95□□□□□ -0.66
CTPS1-202ENST00000372621 CRIM1Q9NZV1 1036 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 DOCK10Q96BY6 2186 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 FREM1Q5H8C1 2179 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 IGHEP01854 428 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 CFIP05156 583 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 RPS18P62269 152 aaKnown RBP10.95□□□□□ -0.66
CTPS1-202ENST00000372621 ABHD14BQ96IU4 210 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 C20orf24Q9BUV8 137 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 SMDT1Q9H4I9 107 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 FAM86C1Q9NVL1 165 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 FBXO7Q9Y3I1 522 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 RFNGQ9Y644 331 aa10.95□□□□□ -0.66
CTPS1-202ENST00000372621 A6NLC8 198 aa10.94□□□□□ -0.66
CTPS1-202ENST00000372621 ZNF724A8MTY0 619 aa10.94□□□□□ -0.66
CTPS1-202ENST00000372621 PROB1E7EW31 1015 aa10.94□□□□□ -0.66
CTPS1-202ENST00000372621 TRAPPC6AO75865 159 aa10.94□□□□□ -0.66
CTPS1-202ENST00000372621 TUSC2O75896 110 aa10.94□□□□□ -0.66
CTPS1-202ENST00000372621 DAOP14920 347 aa10.94□□□□□ -0.66
CTPS1-202ENST00000372621 NKX2-1P43699 371 aaPredicted RBP10.94□□□□□ -0.66
CTPS1-202ENST00000372621 FGF12P61328 243 aa10.94□□□□□ -0.66
CTPS1-202ENST00000372621 POLR2GP62487 172 aaKnown RBP eCLIP10.94□□□□□ -0.66
CTPS1-202ENST00000372621 ZNF266Q14584 549 aa10.94□□□□□ -0.66
CTPS1-202ENST00000372621 NMSQ5H8A3 153 aa10.94□□□□□ -0.66
CTPS1-202ENST00000372621 SAXO1Q8IYX7 474 aa10.94□□□□□ -0.66
CTPS1-202ENST00000372621 FAM213BQ8TBF2 198 aa10.94□□□□□ -0.66
CTPS1-202ENST00000372621 SIGLEC12Q96PQ1 595 aa10.94□□□□□ -0.66
CTPS1-202ENST00000372621 IGKV3D-15A0A087WSY6 115 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms