RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 SP6Q3SY56 376 aa9.23□□□□□ -0.93
PRDM1-201ENST00000369089 PARM1Q6UWI2 310 aa9.23□□□□□ -0.93
PRDM1-201ENST00000369089 UBR3Q6ZT12 1888 aa9.23□□□□□ -0.93
PRDM1-201ENST00000369089 LINC01551Q86U37 167 aa9.23□□□□□ -0.93
PRDM1-201ENST00000369089 ARHGEF39Q8N4T4 335 aa9.23□□□□□ -0.93
PRDM1-201ENST00000369089 OR10AG1Q8NH19 301 aa9.23□□□□□ -0.93
PRDM1-201ENST00000369089 METTL7AQ9H8H3 244 aa9.23□□□□□ -0.93
PRDM1-201ENST00000369089 MTCH1Q9NZJ7 389 aa9.23□□□□□ -0.93
PRDM1-201ENST00000369089 A0A0U1RQV5 110 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 GCM2O75603 506 aaPredicted RBP9.22□□□□□ -0.93
PRDM1-201ENST00000369089 MAS1LP35410 378 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 ATP5IP56385 69 aaPredicted RBP9.22□□□□□ -0.93
PRDM1-201ENST00000369089 RPS20P60866 119 aaKnown RBP9.22□□□□□ -0.93
PRDM1-201ENST00000369089 NHLRC2Q8NBF2 726 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 RLN3Q8WXF3 142 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 WDYHV1Q96HA8 205 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 MFRPQ9BY79 579 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 FBXO34Q9NWN3 711 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 PLAGL1Q9UM63 463 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 TBL2Q9Y4P3 447 aaKnown RBP9.22□□□□□ -0.93
PRDM1-201ENST00000369089 XIRP1Q702N8 1843 aaKnown RBP9.22□□□□□ -0.93
PRDM1-201ENST00000369089 SHHQ15465 462 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 CLUHP3Q96NS8 147 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 TRIB1Q96RU8 372 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 CES1P1Q9UKY3 287 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 OR1A2Q9Y585 309 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.22□□□□□ -0.93
PRDM1-201ENST00000369089 LOC107986453A0A1B0GWG9 222 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 H3BUT2 72 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 H7C1C5 153 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 PTGER1P34995 402 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 RPL13AP40429 203 aaKnown RBP9.22□□□□□ -0.93
PRDM1-201ENST00000369089 DYNLT3P51808 116 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 NSDHLQ15738 373 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 FER1L6-AS1Q8NA97 138 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 BHLHE23Q8NDY6 225 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 OR52E5Q8NH55 327 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 SMIM14Q96QK8 99 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 SLC5A6Q9Y289 635 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 A0A1W2PP55 124 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 NPIPB15A6NHN6 443 aaPredicted RBP9.22□□□□□ -0.93
PRDM1-201ENST00000369089 OR5B21A6NL26 309 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 IL12BP29460 328 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 PRICKLE4Q2TBC4 344 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 FAM71F2Q6NXP2 309 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 SLCO4C1Q6ZQN7 724 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 ARRDC3Q96B67 414 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 LPAR4Q99677 370 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 CITED2Q99967 270 aaPredicted RBP9.22□□□□□ -0.93
PRDM1-201ENST00000369089 PIMREGQ9BSJ6 248 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 PELI2Q9HAT8 420 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 ST6GALNAC2Q9UJ37 374 aa9.22□□□□□ -0.93
PRDM1-201ENST00000369089 MRPS16Q9Y3D3 137 aaKnown RBP9.22□□□□□ -0.93
PRDM1-201ENST00000369089 A0A1B0GU03 582 aa9.21□□□□□ -0.93
PRDM1-201ENST00000369089 C7orf71A4D174 169 aa9.21□□□□□ -0.93
PRDM1-201ENST00000369089 OR5AL1P0C617 328 aa9.21□□□□□ -0.93
PRDM1-201ENST00000369089 PLCXD2Q0VAA5 305 aa9.21□□□□□ -0.93
PRDM1-201ENST00000369089 TCTN1Q2MV58 587 aa9.21□□□□□ -0.93
PRDM1-201ENST00000369089 SPANXN5Q5MJ07 72 aa9.21□□□□□ -0.93
PRDM1-201ENST00000369089 FAM57BQ71RH2 274 aa9.21□□□□□ -0.93
PRDM1-201ENST00000369089 FAM89BQ8N5H3 189 aa9.21□□□□□ -0.93
PRDM1-201ENST00000369089 OR4P4Q8NGL7 312 aa9.21□□□□□ -0.93
PRDM1-201ENST00000369089 GABRG3Q99928 467 aa9.21□□□□□ -0.93
PRDM1-201ENST00000369089 VCX2Q9H322 139 aa9.21□□□□□ -0.93
PRDM1-201ENST00000369089 A0A1B0GWA3 101 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 PITX3O75364 302 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 CD1AP06126 327 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 CA3P07451 260 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 HOXD9P28356 352 aaPredicted RBP9.21□□□□□ -0.94
PRDM1-201ENST00000369089 NTSR1P30989 418 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 RUNX3Q13761 415 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 DGAT2L6Q6ZPD8 337 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 NRSN1Q8IZ57 195 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 MRPL24Q96A35 216 aaKnown RBP9.21□□□□□ -0.94
PRDM1-201ENST00000369089 BORCS8Q96FH0 119 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 OR6C1Q96RD1 312 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 GLIPR2Q9H4G4 154 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 SPANXA1Q9NS26 97 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 A0A0G2JK05 382 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 A0A0G2JMM0 328 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 A0A1W2PPB8 328 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 FEZF1A0PJY2 475 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 KIR3DP1A8MWS1 328 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 ARPC3O15145 178 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 FAM157CP0CG43 387 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 SCGB1C2P0DMR2 95 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 DRD1P21728 446 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 PFN3P60673 137 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 MEF2BQ02080 365 aaPredicted RBP9.21□□□□□ -0.94
PRDM1-201ENST00000369089 FMODQ06828 376 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 MRPL54Q6P161 138 aaKnown RBP9.21□□□□□ -0.94
PRDM1-201ENST00000369089 ABHD5Q8WTS1 349 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 PSENENQ9NZ42 101 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 HS3ST3A1Q9Y663 406 aa9.21□□□□□ -0.94
PRDM1-201ENST00000369089 COL5A3P25940 1745 aaPredicted RBP9.21□□□□□ -0.94
PRDM1-201ENST00000369089 DICER1Q9UPY3 1922 aaKnown RBP9.21□□□□□ -0.94
PRDM1-201ENST00000369089 IGHV2OR16-5A0A0B4J2B6 119 aa9.2□□□□□ -0.94
PRDM1-201ENST00000369089 BLACEA4D250 179 aa9.2□□□□□ -0.94
PRDM1-201ENST00000369089 C11orf94C9JXX5 98 aa9.2□□□□□ -0.94
PRDM1-201ENST00000369089 H3BP45 60 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms