RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CEACAM3P40198 252 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 RASSF2P50749 326 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 ARHGDIBP52566 201 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 HLA-DRB5Q30154 266 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 ABCA11PQ4W5N1 156 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 TPTE2P1Q5T6R2 138 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 CHST4Q8NCG5 386 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 OR51A4Q8NGJ6 313 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 CAPSLQ8WWF8 208 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 RNFT2Q96EX2 444 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 COQ2Q96H96 371 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 HRASLS5Q96KN8 279 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 SPACA5Q96QH8 159 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 PCDHGB5Q9Y5G0 923 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 TSSC4Q9Y5U2 329 aaPredicted RBP12.77□□□□□ -0.37
CKS1B-202ENST00000368436 FAM172BPA6NC97 362 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 SAC3D1A6NKF1 404 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 ZNF729A6NN14 1252 aaPredicted RBP12.76□□□□□ -0.37
CKS1B-202ENST00000368436 OOSP1A8MZH6 123 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 SLC33A1O00400 549 aaPredicted RBP12.76□□□□□ -0.37
CKS1B-202ENST00000368436 LPLP06858 475 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 OCM2P0CE71 109 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 OCMP0CE72 109 aaPredicted RBP12.76□□□□□ -0.37
CKS1B-202ENST00000368436 CGB3P0DN86 165 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 CGB7P0DN87 165 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 ZNF44P15621 663 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 PTGFRP43088 359 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 PRRX1P54821 245 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 SNRPGP62308 76 aaKnown RBP12.76□□□□□ -0.37
CKS1B-202ENST00000368436 C17orf58Q2M2W7 97 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 KRBOX4Q5JUW0 171 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 MEDAGQ5VYS4 303 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 CCDC121Q6ZUS5 278 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 ACBD7Q8N6N7 88 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 OR5D18Q8NGL1 313 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 OR13C3Q8NGS6 347 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 OR13C9Q8NGT0 318 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 MYDGFQ969H8 173 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 PELI1Q96FA3 418 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 ZCCHC4Q9H5U6 513 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 IMPAD1Q9NX62 359 aa12.76□□□□□ -0.37
CKS1B-202ENST00000368436 EXOGQ9Y2C4 368 aaKnown RBP12.76□□□□□ -0.37
CKS1B-202ENST00000368436 J3QLW9 94 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 TOR1AO14656 332 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 ATP5HO75947 161 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 ALPLP05186 524 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 ZNF19P17023 458 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 ZP1P60852 638 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 SCN1BQ07699 218 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 ALKBH1Q13686 389 aaKnown RBP12.75□□□□□ -0.37
CKS1B-202ENST00000368436 CDK5R1Q15078 307 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 UTF1Q5T230 341 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 OR4X2Q8NGF9 303 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 OR4D6Q8NGJ1 314 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 NEK6Q9HC98 313 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 MYRFQ9Y2G1 1151 aa12.75□□□□□ -0.37
CKS1B-202ENST00000368436 FAM90A18PA6NE21 464 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 FAM90A16PA6NEW6 464 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 FAM90A20PA6NIJ5 464 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 FAM90A9PA6NNJ1 464 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 FAM90A12PA8MX19 464 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 FAM90A5PA8MXJ8 464 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 M0QZK8 103 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 DYNC1I1O14576 645 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 DEGS1O15121 323 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 FAM90A15PP0C7V4 464 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 FAM90A13PP0C7W8 464 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 FAM90A14PP0C7W9 464 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 FAM90A24PP0C7X0 464 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 MNDAP41218 407 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 SLC35A2P78381 396 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 CCDC144NLQ6NUI1 221 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 C10orf99Q6UWK7 81 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 OR9G1Q8NH87 305 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 RCC1LQ96I51 464 aaKnown RBP12.74□□□□□ -0.37
CKS1B-202ENST00000368436 C4orf36Q96KX1 117 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 PPIL3Q9H2H8 161 aaKnown RBP12.74□□□□□ -0.37
CKS1B-202ENST00000368436 NCOR1P1Q9H4R4 102 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 OR6C3Q9NZP0 311 aa12.74□□□□□ -0.37
CKS1B-202ENST00000368436 KBTBD11-OT1A0A1B0GTJ5 212 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 SH2D7A6NKC9 451 aaPredicted RBP12.73□□□□□ -0.37
CKS1B-202ENST00000368436 DUS4LO95620 317 aaKnown RBP12.73□□□□□ -0.37
CKS1B-202ENST00000368436 MPIG6BO95866 241 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 PF4P02776 101 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 DBTP11182 482 aaKnown RBP12.73□□□□□ -0.37
CKS1B-202ENST00000368436 ATXN7L3Q14CW9 347 aaPredicted RBP12.73□□□□□ -0.37
CKS1B-202ENST00000368436 KISS1Q15726 138 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 ELP2Q6IA86 826 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 THNSL2Q86YJ6 484 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 SERPINA12Q8IW75 414 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 PARP16Q8N5Y8 322 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 OR51T1Q8NGJ9 327 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 LGALS12Q96DT0 336 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 KIRREL1Q96J84 757 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 LINC00574Q9H8X3 128 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 INPP5EQ9NRR6 644 aa12.73□□□□□ -0.37
CKS1B-202ENST00000368436 SNTNA6NMZ2 147 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 K7EIL1 84 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 SULT1B1O43704 296 aa12.72□□□□□ -0.37
CKS1B-202ENST00000368436 RPSAP08865 295 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms