RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 FUT3P21217 361 aa17.09■□□□□ 0.33
TRIM58-201ENST00000366481 GABREP78334 506 aa17.09■□□□□ 0.33
TRIM58-201ENST00000366481 LGI3Q8N145 548 aa17.09■□□□□ 0.33
TRIM58-201ENST00000366481 OR5C1Q8NGR4 320 aa17.09■□□□□ 0.33
TRIM58-201ENST00000366481 C2orf88Q9BSF0 95 aa17.09■□□□□ 0.33
TRIM58-201ENST00000366481 NAA60Q9H7X0 242 aa17.09■□□□□ 0.33
TRIM58-201ENST00000366481 ANGPTL7O43827 346 aa17.08■□□□□ 0.33
TRIM58-201ENST00000366481 GLB1P16278 677 aa17.08■□□□□ 0.33
TRIM58-201ENST00000366481 FAHP16930 419 aa17.08■□□□□ 0.33
TRIM58-201ENST00000366481 ZNF43P17038 809 aa17.08■□□□□ 0.33
TRIM58-201ENST00000366481 CLDN17P56750 224 aa17.08■□□□□ 0.33
TRIM58-201ENST00000366481 RIF1Q5UIP0 2472 aaKnown RBP17.08■□□□□ 0.32
TRIM58-201ENST00000366481 ZNF17P17021 662 aa17.08■□□□□ 0.32
TRIM58-201ENST00000366481 IDH3GP51553 393 aaPredicted RBP17.08■□□□□ 0.32
TRIM58-201ENST00000366481 ZNF664Q8N3J9 261 aa17.08■□□□□ 0.32
TRIM58-201ENST00000366481 ST8SIA1Q92185 356 aa17.08■□□□□ 0.32
TRIM58-201ENST00000366481 C1orf147Q96MC9 270 aaPredicted RBP17.08■□□□□ 0.32
TRIM58-201ENST00000366481 YPEL4Q96NS1 127 aa17.08■□□□□ 0.32
TRIM58-201ENST00000366481 ZNF581Q9P0T4 197 aa17.08■□□□□ 0.32
TRIM58-201ENST00000366481 SERPINE3A8MV23 424 aa17.08■□□□□ 0.32
TRIM58-201ENST00000366481 CLDN34H7C241 214 aa17.08■□□□□ 0.32
TRIM58-201ENST00000366481 ZNF25P17030 456 aaPredicted RBP17.08■□□□□ 0.32
TRIM58-201ENST00000366481 UCP2P55851 309 aa17.08■□□□□ 0.32
TRIM58-201ENST00000366481 NUDT16L1Q9BRJ7 211 aaKnown RBP17.08■□□□□ 0.32
TRIM58-201ENST00000366481 DDA1Q9BW61 102 aa17.08■□□□□ 0.32
TRIM58-201ENST00000366481 PHF7Q9BWX1 381 aaPredicted RBP17.08■□□□□ 0.32
TRIM58-201ENST00000366481 ANXA10Q9UJ72 324 aa17.08■□□□□ 0.32
TRIM58-201ENST00000366481 EML6Q6ZMW3 1958 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 IGKV1-9A0A0C4DH69 117 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 BCAT2O15382 392 aaPredicted RBP17.07■□□□□ 0.32
TRIM58-201ENST00000366481 IGHG1P01857 330 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 LRP11Q86VZ4 500 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 MRPL41Q8IXM3 137 aaKnown RBP17.07■□□□□ 0.32
TRIM58-201ENST00000366481 NFAM1Q8NET5 270 aaPredicted RBP17.07■□□□□ 0.32
TRIM58-201ENST00000366481 RHBDD1Q8TEB9 315 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 SIRT7Q9NRC8 400 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 KIAA1456Q9P272 454 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 CACNA1HO95180 2353 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 SHANK1Q9Y566 2161 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 MBP02144 154 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 PNLIPP16233 465 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 MAS1LP35410 378 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 GUCA1AP43080 201 aaPredicted RBP17.07■□□□□ 0.32
TRIM58-201ENST00000366481 FOXO1Q12778 655 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 MPV17LQ2QL34 196 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 PLPPR5Q32ZL2 321 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 LCN15Q6UWW0 184 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 ARV1Q9H2C2 271 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 ALKBH4Q9NXW9 302 aa17.07■□□□□ 0.32
TRIM58-201ENST00000366481 UBE2J1Q9Y385 318 aaPredicted RBP17.07■□□□□ 0.32
TRIM58-201ENST00000366481 C9J4A7 227 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 SRFP11831 508 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 BTF3P20290 206 aaKnown RBP17.06■□□□□ 0.32
TRIM58-201ENST00000366481 HERV-K104P61576 105 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 PDCD1Q15116 288 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 WDR25Q64LD2 544 aaPredicted RBP17.06■□□□□ 0.32
TRIM58-201ENST00000366481 SYT3Q9BQG1 590 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 PITPNC1Q9UKF7 332 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 COL4A2P08572 1712 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 EREGO14944 169 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 PGA3P0DJD8 388 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 NKX2-1P43699 371 aaPredicted RBP17.06■□□□□ 0.32
TRIM58-201ENST00000366481 HNF4GQ14541 408 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 IL13RA2Q14627 380 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 UCN2Q96RP3 112 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 MRPL13Q9BYD1 178 aaKnown RBP17.06■□□□□ 0.32
TRIM58-201ENST00000366481 TRAF3IP2O43734 574 aaPredicted RBP17.06■□□□□ 0.32
TRIM58-201ENST00000366481 HLA-HP01893 362 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 ICAM4Q14773 271 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 LBHQ53QV2 105 aaPredicted RBP17.06■□□□□ 0.32
TRIM58-201ENST00000366481 NOXO1Q8NFA2 376 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 SLC2A9Q9NRM0 540 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 MYOTQ9UBF9 498 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 FBLN5Q9UBX5 448 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 TP53TG5Q9Y2B4 290 aa17.06■□□□□ 0.32
TRIM58-201ENST00000366481 ASPMQ8IZT6 3477 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 CPAMD8Q8IZJ3 1885 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 RAB4BP61018 213 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 MRPS34P82930 218 aaKnown RBP17.05■□□□□ 0.32
TRIM58-201ENST00000366481 H3F3AP84243 136 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 ZNF837Q96EG3 531 aaPredicted RBP17.05■□□□□ 0.32
TRIM58-201ENST00000366481 RBM24Q9BX46 236 aaKnown RBP17.05■□□□□ 0.32
TRIM58-201ENST00000366481 MRPL37Q9BZE1 423 aaKnown RBP17.05■□□□□ 0.32
TRIM58-201ENST00000366481 NECAP2Q9NVZ3 263 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 A0A087WWC5 75 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 XKRY2A2RUG3 117 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 A8MWP6 167 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 H3BP45 60 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 PATE4P0C8F1 98 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 GZMBP10144 247 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 ECI1P42126 302 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 TLE4Q04727 773 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 SLC10A1Q14973 349 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 ADIRFQ15847 76 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 LIAT1Q6ZQX7 453 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 NDUFAF3Q9BU61 184 aa17.05■□□□□ 0.32
TRIM58-201ENST00000366481 DFFBO76075 338 aa17.04■□□□□ 0.32
TRIM58-201ENST00000366481 SCGB1D1O95968 90 aa17.04■□□□□ 0.32
TRIM58-201ENST00000366481 CSNK1A1P48729 337 aa17.04■□□□□ 0.32
TRIM58-201ENST00000366481 CD81P60033 236 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms