RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 DTX3Q8N9I9 347 aa10.99□□□□□ -0.65
TNFRSF1A-202ENST00000366159 PXT1Q8NFP0 134 aa10.99□□□□□ -0.65
TNFRSF1A-202ENST00000366159 OR51T1Q8NGJ9 327 aa10.99□□□□□ -0.65
TNFRSF1A-202ENST00000366159 WNT10AQ9GZT5 417 aa10.99□□□□□ -0.65
TNFRSF1A-202ENST00000366159 NEK6Q9HC98 313 aa10.99□□□□□ -0.65
TNFRSF1A-202ENST00000366159 SMPD3Q9NY59 655 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF1A-202ENST00000366159 PITPNC1Q9UKF7 332 aa10.99□□□□□ -0.65
TNFRSF1A-202ENST00000366159 A0A087X0M5 115 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 A0A1B0GX30 115 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 FUOMA2VDF0 154 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 TMEM225BP0DP42 221 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 CDK2P24941 298 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 MTNR1BP49286 362 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 ETV1P50549 477 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 BDH1Q02338 343 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 PAX5Q02548 391 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 HABP2Q14520 560 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 C17orf58Q2M2W7 97 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 HIST2H2BDQ6DRA6 164 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 OR52W1Q6IF63 320 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 RPL22L1Q6P5R6 122 aaKnown RBP10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 Q6ZS46 218 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 Q6ZTK2 550 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 RTN4RL2Q86UN3 420 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 TMEM219Q86XT9 240 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 ABHD12Q8N2K0 398 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 OR51A2Q8NGJ7 313 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 GAL3ST2Q9H3Q3 398 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 NCOR1P1Q9H4R4 102 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 ABCB10Q9NRK6 738 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 DHDHQ9UQ10 334 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 HILPDAQ9Y5L2 63 aa10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 SIRT4Q9Y6E7 314 aaPredicted RBP10.98□□□□□ -0.65
TNFRSF1A-202ENST00000366159 TRGV10A0A0A0MS01 117 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 ODAMA1E959 279 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 LY6LH3BQJ8 138 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 GABRPO00591 440 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 OGG1O15527 345 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 ALDOBP05062 364 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 HCKP08631 526 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 CSF1P09603 554 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 OCM2P0CE71 109 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 OCMP0CE72 109 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 ZNF44P15621 663 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 DCKP27707 260 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 HTR1DP28221 377 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 BLCAPP62952 87 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 ZSCAN26Q16670 478 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 UTF1Q5T230 341 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 PRAMEF5Q5TYX0 476 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 OR2G6Q5TZ20 316 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 TRAPPC6BQ86SZ2 158 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 ZNF485Q8NCK3 441 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 FAM110DQ8TAY7 271 aaPredicted RBP10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 PPIL3Q9H2H8 161 aaKnown RBP10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 LINC00574Q9H8X3 128 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 DPM3Q9P2X0 92 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 PCDHGB5Q9Y5G0 923 aa10.97□□□□□ -0.65
TNFRSF1A-202ENST00000366159 KIAA2026Q5HYC2 2103 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 TRAV24A0A0B4J272 114 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 ZNF729A6NN14 1252 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 DEGS1O15121 323 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 CLIC3O95833 236 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 LALBAP00709 142 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 RAB3AP20336 220 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 ADARB1P78563 741 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 SLC34A1Q06495 639 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 SCN1BQ07699 218 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 KRBOX4Q5JUW0 171 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 ZNF555Q8NEP9 628 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 NDNFQ8TB73 568 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 CNIH3Q8TBE1 160 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 GPR148Q8TDV2 347 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 TSEN15Q8WW01 171 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 NKX3-1Q99801 234 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 PRSS22Q9GZN4 317 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 ZNF286AQ9HBT8 521 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 BABAM2Q9NXR7 383 aa10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 DIMT1Q9UNQ2 313 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-202ENST00000366159 KBTBD11-OT1A0A1B0GTJ5 212 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 ADARB2-AS1A8MUL3 147 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 H0YJX3 145 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 BUB1B-PAK6H3BSN5 160 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 F2RL2O00254 374 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 BAG2O95816 211 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OPN1MWP04001 364 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OPN1MW2P0DN77 364 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OPN1MW3P0DN78 364 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 VSIG10L2P0DP72 767 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 IGFBP3P17936 291 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 SOX2P48431 317 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 IL13RA2Q14627 380 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 ATXN7L3Q14CW9 347 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 HLA-DRB5Q30154 266 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 FBLN7Q53RD9 439 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 NHLRC3Q5JS37 347 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 C11orf44Q8N8P7 122 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 ZNF596Q8TC21 504 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 TMEM106AQ96A25 262 aa10.95□□□□□ -0.66
TNFRSF1A-202ENST00000366159 OCSTAMPQ9BR26 566 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms