RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 PNLIPRP3Q17RR3 467 aa17.27■□□□□ 0.36
SHISA4-201ENST00000362011 OR5T2Q8NGG2 359 aa17.27■□□□□ 0.36
SHISA4-201ENST00000362011 FLNAP21333 2647 aaKnown RBP17.27■□□□□ 0.35
SHISA4-201ENST00000362011 SERPINE3A8MV23 424 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 MCRIP1C9JLW8 97 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 NDUFS7O75251 213 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 GLAP06280 429 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 MELTFP08582 738 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 PTHLHP12272 177 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 PRDX2P32119 198 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 PRSS3P35030 304 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 ARFRP1Q13795 201 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 RNASE12Q5GAN4 147 aaKnown RBP17.26■□□□□ 0.35
SHISA4-201ENST00000362011 STUMQ69YW2 141 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 PEG10Q86TG7 708 aaKnown RBP17.26■□□□□ 0.35
SHISA4-201ENST00000362011 SUMF2Q8NBJ7 301 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 DEFB108BQ8NET1 73 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 ST8SIA4Q92187 359 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 GCDHQ92947 438 aaPredicted RBP17.26■□□□□ 0.35
SHISA4-201ENST00000362011 BORCS5Q969J3 196 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 SDHCQ99643 169 aaPredicted RBP17.26■□□□□ 0.35
SHISA4-201ENST00000362011 SULT4A1Q9BR01 284 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 CCDC32Q9BV29 185 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 KCNK7Q9Y2U2 307 aa17.26■□□□□ 0.35
SHISA4-201ENST00000362011 IGKV1D-17A0A075B6S4 117 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 TRAV24A0A0B4J272 114 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 GABARAPH6UMI1 98 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 SULT1C2O00338 296 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 SLC33A1O00400 549 aaPredicted RBP17.25■□□□□ 0.35
SHISA4-201ENST00000362011 GSTZ1O43708 216 aaPredicted RBP17.25■□□□□ 0.35
SHISA4-201ENST00000362011 CA11O75493 328 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 LMO1P25800 156 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 GNG2P59768 71 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 COL10A1Q03692 680 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 RBM39Q14498 530 aaKnown RBP17.25■□□□□ 0.35
SHISA4-201ENST00000362011 PAN3Q58A45 887 aaKnown RBP17.25■□□□□ 0.35
SHISA4-201ENST00000362011 HACD4Q5VWC8 232 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 OLFML2AQ68BL7 652 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 Q8N402 240 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 CD177Q8N6Q3 437 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 ANGPTL6Q8NI99 470 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 NEK7Q8TDX7 302 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 SMIM4Q8WVI0 70 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 FCAMRQ8WWV6 532 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 FAAP24Q9BTP7 215 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 CHODLQ9H9P2 273 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 ZNF222Q9UK12 451 aa17.25■□□□□ 0.35
SHISA4-201ENST00000362011 ELF5Q9UKW6 265 aaPredicted RBP17.25■□□□□ 0.35
SHISA4-201ENST00000362011 UBE2QL1A1L167 161 aa17.24■□□□□ 0.35
SHISA4-201ENST00000362011 NKX6-3A6NJ46 265 aa17.24■□□□□ 0.35
SHISA4-201ENST00000362011 FSTL3O95633 263 aa17.24■□□□□ 0.35
SHISA4-201ENST00000362011 GYPAP02724 150 aa17.24■□□□□ 0.35
SHISA4-201ENST00000362011 BTG1P62324 171 aa17.24■□□□□ 0.35
SHISA4-201ENST00000362011 DGCR2P98153 550 aa17.24■□□□□ 0.35
SHISA4-201ENST00000362011 GUCA2AQ02747 115 aa17.24■□□□□ 0.35
SHISA4-201ENST00000362011 KCNJ8Q15842 424 aa17.24■□□□□ 0.35
SHISA4-201ENST00000362011 BRICD5Q6PL45 260 aa17.24■□□□□ 0.35
SHISA4-201ENST00000362011 OR8H2Q8N162 312 aa17.24■□□□□ 0.35
SHISA4-201ENST00000362011 TIMD4Q96H15 378 aa17.24■□□□□ 0.35
SHISA4-201ENST00000362011 DPCDQ9BVM2 203 aaPredicted RBP17.24■□□□□ 0.35
SHISA4-201ENST00000362011 SCPEP1Q9HB40 452 aa17.24■□□□□ 0.35
SHISA4-201ENST00000362011 MYOZ1Q9NP98 299 aaPredicted RBP17.24■□□□□ 0.35
SHISA4-201ENST00000362011 ZNF701Q9NV72 531 aaPredicted RBP17.24■□□□□ 0.35
SHISA4-201ENST00000362011 MEIOCA2RUB1 952 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 HSPB6O14558 160 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 TFF1P04155 84 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 CD3GP09693 182 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 MRPS15P82914 257 aaKnown RBP17.23■□□□□ 0.35
SHISA4-201ENST00000362011 OR52I2Q8NH67 350 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 GPX8Q8TED1 209 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 NUDCD2Q8WVJ2 157 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 RAB1CQ92928 201 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 CYYR1Q96J86 154 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 CMSS1Q9BQ75 279 aaKnown RBP17.23■□□□□ 0.35
SHISA4-201ENST00000362011 DNTTIP1Q9H147 329 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 ZNF665Q9H7R5 613 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 BARX1Q9HBU1 254 aaPredicted RBP17.23■□□□□ 0.35
SHISA4-201ENST00000362011 AK3Q9UIJ7 227 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 METRNQ9UJH8 293 aa17.23■□□□□ 0.35
SHISA4-201ENST00000362011 PPIHO43447 177 aaKnown RBP17.22■□□□□ 0.35
SHISA4-201ENST00000362011 IGHV2-70P01814 119 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 IGHV4-39P01824 125 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 LPLP06858 475 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 MDH2P40926 338 aaKnown RBP17.22■□□□□ 0.35
SHISA4-201ENST00000362011 ZMYND11Q15326 602 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 CARTPTQ16568 116 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 DEFB113Q30KQ7 82 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 SHEQ5VZ18 495 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 ZNF788Q6ZQV5 615 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 DNM1P46Q6ZS02 220 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 TRAPPC6BQ86SZ2 158 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 ZNF561Q8N587 486 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 ASCC1Q8N9N2 400 aaKnown RBP17.22■□□□□ 0.35
SHISA4-201ENST00000362011 PPP1R35Q8TAP8 253 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 SDSLQ96GA7 329 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 GAFA1Q96PS6 74 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 PPA2Q9H2U2 334 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 KIAA2026Q5HYC2 2103 aa17.22■□□□□ 0.35
SHISA4-201ENST00000362011 NDUFA2O43678 99 aa17.21■□□□□ 0.35
SHISA4-201ENST00000362011 UPK1BO75841 260 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms