RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 TATDN3Q17R31 274 aa19.51■□□□□ 0.71
SDF4-202ENST00000360001 OR14J1Q9UGF5 321 aa19.51■□□□□ 0.71
SDF4-202ENST00000360001 FLNCQ14315 2725 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 DISC1C4P0D8 188 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 LHBP01229 141 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 H2AFB2P0C5Z0 115 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 VAX1Q5SQQ9 334 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 NEK7Q8TDX7 302 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 ERGIC1Q969X5 290 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 SLC2A8Q9NY64 477 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 ARFGEF3Q5TH69 2177 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 IGFBP2P18065 325 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 CARTPTQ16568 116 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 OR5AP2Q8NGF4 316 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 Q8TCH9 128 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 GINS4Q9BRT9 223 aa19.5■□□□□ 0.71
SDF4-202ENST00000360001 RAG2P55895 527 aa19.49■□□□□ 0.71
SDF4-202ENST00000360001 TAS2R46P59540 309 aa19.49■□□□□ 0.71
SDF4-202ENST00000360001 RBM39Q14498 530 aaKnown RBP19.49■□□□□ 0.71
SDF4-202ENST00000360001 SWI5Q1ZZU3 235 aa19.49■□□□□ 0.71
SDF4-202ENST00000360001 PAN3Q58A45 887 aaKnown RBP19.49■□□□□ 0.71
SDF4-202ENST00000360001 FAM209AQ5JX71 171 aa19.49■□□□□ 0.71
SDF4-202ENST00000360001 IDO2Q6ZQW0 420 aa19.49■□□□□ 0.71
SDF4-202ENST00000360001 OR5H2Q8NGV7 314 aa19.49■□□□□ 0.71
SDF4-202ENST00000360001 ETAA1Q9NY74 926 aa19.49■□□□□ 0.71
SDF4-202ENST00000360001 GLS2Q9UI32 602 aa19.49■□□□□ 0.71
SDF4-202ENST00000360001 SCP2D1Q9UJQ7 156 aa19.49■□□□□ 0.71
SDF4-202ENST00000360001 PFDN1O60925 122 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 LMO1P25800 156 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 TESK1Q15569 626 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 DYNLRB1Q9NP97 96 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 RNF7Q9UBF6 113 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 ANXA10Q9UJ72 324 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 RFPL4AA6NLU0 287 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 RFPL4AL1F8VTS6 287 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 ARPC1BO15143 372 aaKnown RBP19.48■□□□□ 0.71
SDF4-202ENST00000360001 IFNA6P05013 189 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 TNFRSF1AP19438 455 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 CHRFAM7AQ494W8 412 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 SCGB2B2Q4G0G5 96 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 FAM90A1Q86YD7 464 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 MUC15Q8N387 334 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 BOLLQ8N9W6 283 aaKnown RBP19.48■□□□□ 0.71
SDF4-202ENST00000360001 OR13C8Q8NGS7 320 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 FAM222BQ8WU58 562 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 PRRT1Q99946 306 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 MS4A5Q9H3V2 200 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 CHMP1AQ9HD42 196 aaPredicted RBP19.48■□□□□ 0.71
SDF4-202ENST00000360001 PPP1R3CQ9UQK1 317 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 NPTNQ9Y639 398 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 ALG5Q9Y673 324 aa19.48■□□□□ 0.71
SDF4-202ENST00000360001 HRNRQ86YZ3 2850 aaPredicted RBP19.47■□□□□ 0.71
SDF4-202ENST00000360001 OR3A3P47888 321 aa19.47■□□□□ 0.71
SDF4-202ENST00000360001 ZMYND11Q15326 602 aa19.47■□□□□ 0.71
SDF4-202ENST00000360001 AGAP6Q5VW22 663 aa19.47■□□□□ 0.71
SDF4-202ENST00000360001 SHEQ5VZ18 495 aa19.47■□□□□ 0.71
SDF4-202ENST00000360001 TGIF2LYQ8IUE0 185 aa19.47■□□□□ 0.71
SDF4-202ENST00000360001 MRGPRFQ96AM1 343 aa19.47■□□□□ 0.71
SDF4-202ENST00000360001 TREM2Q9NZC2 230 aa19.47■□□□□ 0.71
SDF4-202ENST00000360001 DYSFO75923 2080 aa19.47■□□□□ 0.71
SDF4-202ENST00000360001 PYCARD-AS1I3L0S3 204 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 PSPNO60542 156 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 PEX14O75381 377 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 DHFRP00374 187 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 TFF1P04155 84 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 OVCH2Q7RTZ1 564 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 ARRDC1Q8N5I2 433 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 OR5T2Q8NGG2 359 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 EGLN1Q9GZT9 426 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 PPA2Q9H2U2 334 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 RIMS4Q9H426 269 aaPredicted RBP19.46■□□□□ 0.71
SDF4-202ENST00000360001 TMEM165Q9HC07 324 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 WIPI2Q9Y4P8 454 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 IFNL4K9M1U5 179 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 SDCBPO00560 298 aaPredicted RBP19.46■□□□□ 0.71
SDF4-202ENST00000360001 PSG2P11465 335 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 CDK10Q15131 360 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 SRSF7Q16629 238 aaKnown RBP eCLIP19.46■□□□□ 0.712e-11■■■■■ 40.5
SDF4-202ENST00000360001 Q6ZS49 121 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 PLPPR1Q8TBJ4 325 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 MRPL30Q8TCC3 161 aaKnown RBP19.46■□□□□ 0.71
SDF4-202ENST00000360001 SLC25A21Q9BQT8 299 aaPredicted RBP19.46■□□□□ 0.71
SDF4-202ENST00000360001 SAP30LQ9HAJ7 183 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 ZNF286AQ9HBT8 521 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 Q9N2K0 584 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 DECR2Q9NUI1 292 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 EHFQ9NZC4 300 aa19.46■□□□□ 0.71
SDF4-202ENST00000360001 KMT2BQ9UMN6 2715 aaPredicted RBP19.46■□□□□ 0.71
SDF4-202ENST00000360001 MYO18BQ8IUG5 2567 aa19.45■□□□□ 0.7
SDF4-202ENST00000360001 DOPEY1Q5JWR5 2465 aa19.45■□□□□ 0.7
SDF4-202ENST00000360001 TRBV6-6A0A0A6YYG2 114 aa19.45■□□□□ 0.7
SDF4-202ENST00000360001 CYB5R3P00387 301 aaPredicted RBP19.45■□□□□ 0.7
SDF4-202ENST00000360001 MDH2P40926 338 aaKnown RBP19.45■□□□□ 0.7
SDF4-202ENST00000360001 ARPC4P59998 168 aa19.45■□□□□ 0.7
SDF4-202ENST00000360001 FAM201AQ5SY85 155 aa19.45■□□□□ 0.7
SDF4-202ENST00000360001 C20orf204Q6ZNR8 217 aa19.45■□□□□ 0.7
SDF4-202ENST00000360001 CD177Q8N6Q3 437 aa19.45■□□□□ 0.7
SDF4-202ENST00000360001 OR11L1Q8NGX0 322 aa19.45■□□□□ 0.7
SDF4-202ENST00000360001 DNAJB11Q9UBS4 358 aa19.45■□□□□ 0.7
SDF4-202ENST00000360001 METRNQ9UJH8 293 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms