RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 HLA-BQ31612 363 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 ARMC6Q6NXE6 501 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 ZNF283Q8N7M2 679 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 CCDC71LQ8N9Z2 235 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 NOXO1Q8NFA2 376 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 OR13H1Q8NG92 308 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 OR5D18Q8NGL1 313 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 TMEM18Q96B42 140 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 SLC2A9Q9NRM0 540 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 CISD1Q9NZ45 108 aaKnown RBP12.97□□□□□ -0.33
UBAP1-202ENST00000359544 RFNGQ9Y644 331 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 CACNA1EQ15878 2313 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 CNOT1A5YKK6 2376 aaKnown RBP12.97□□□□□ -0.33
UBAP1-202ENST00000359544 M0QZK8 103 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 GGCTO75223 188 aaKnown RBP12.97□□□□□ -0.33
UBAP1-202ENST00000359544 ZNF17P17021 662 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 CD38P28907 300 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 CCKARP32238 428 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 DCAF7P61962 342 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 PPP1CAP62136 330 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 SRPXP78539 464 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 HSF1Q00613 529 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 COL10A1Q03692 680 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 FOXF1Q12946 379 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 GAGE1Q13065 139 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 H1FNTQ75WM6 255 aaPredicted RBP12.97□□□□□ -0.33
UBAP1-202ENST00000359544 P4HA3Q7Z4N8 544 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 C6orf201Q7Z4U5 140 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 ABHD14BQ96IU4 210 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 BMFQ96LC9 184 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 GAL3ST4Q96RP7 486 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 SDF2L1Q9HCN8 221 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 PNO1Q9NRX1 252 aaKnown RBP12.97□□□□□ -0.33
UBAP1-202ENST00000359544 LYRM2Q9NU23 88 aaPredicted RBP12.97□□□□□ -0.33
UBAP1-202ENST00000359544 GOLT1BQ9Y3E0 138 aa12.97□□□□□ -0.33
UBAP1-202ENST00000359544 A0A1W2PR77 199 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 C17orf51A8MQB3 221 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 STMND1H3BQB6 276 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 IL11P20809 199 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 EPHA1P21709 976 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 VAMP2P63027 116 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 BAXQ07812 192 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 DCAF10Q5QP82 559 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 C1QL2Q7Z5L3 287 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 MRPL52Q86TS9 123 aaKnown RBP12.96□□□□□ -0.33
UBAP1-202ENST00000359544 TGIF2LYQ8IUE0 185 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 OR5L1Q8NGL2 311 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 GPR119Q8TDV5 335 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 PTPMT1Q8WUK0 201 aaPredicted RBP12.96□□□□□ -0.33
UBAP1-202ENST00000359544 ADIPOR1Q96A54 375 aa12.96□□□□□ -0.33
UBAP1-202ENST00000359544 ASCC3Q8N3C0 2202 aaKnown RBP12.96□□□□□ -0.34
UBAP1-202ENST00000359544 NKX2-1P43699 371 aaPredicted RBP12.96□□□□□ -0.34
UBAP1-202ENST00000359544 PDLIM4P50479 330 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 PAX5Q02548 391 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 PHLDA2Q53GA4 152 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 SLC22A18ASQ8N1D0 253 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 OR5C1Q8NGR4 320 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 TMEM171Q8WVE6 324 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 MMABQ96EY8 250 aaPredicted RBP12.96□□□□□ -0.34
UBAP1-202ENST00000359544 HIST1H2AAQ96QV6 131 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 SPIN2AQ99865 258 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 SPIN2BQ9BPZ2 258 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 ANGPTL4Q9BY76 406 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 PCED1AQ9H1Q7 454 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 MED29Q9NX70 200 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 P4HTMQ9NXG6 502 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 LRFN1Q9P244 771 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 NXT1Q9UKK6 140 aaKnown RBP12.96□□□□□ -0.34
UBAP1-202ENST00000359544 B3GALT1Q9Y5Z6 326 aa12.96□□□□□ -0.34
UBAP1-202ENST00000359544 PPP5D1E7EU14 171 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 TNFRSF10CO14798 259 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 PHF1O43189 567 aaPredicted RBP12.95□□□□□ -0.34
UBAP1-202ENST00000359544 DLEU1O43261 78 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 THEGLP0DJG4 465 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 HNRNPA2B1P22626 353 aaKnown RBP12.95□□□□□ -0.34
UBAP1-202ENST00000359544 DTYMKP23919 212 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 FXYD4P59646 89 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 TSPO2Q5TGU0 170 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 Q6ZSR6 202 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 H1FOOQ8IZA3 346 aaPredicted RBP12.95□□□□□ -0.34
UBAP1-202ENST00000359544 TMEM252Q8N6L7 170 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 PATE1Q8WXA2 126 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 TSLPQ969D9 159 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 LIME1Q9H400 295 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 CALHM2Q9HA72 323 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 ELL3Q9HB65 397 aaPredicted RBP12.95□□□□□ -0.34
UBAP1-202ENST00000359544 TMEM9BQ9NQ34 198 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 GNG13Q9P2W3 67 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 GAB2Q9UQC2 676 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 MMACHCQ9Y4U1 282 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 LHFPL6Q9Y693 200 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 CABIN1Q9Y6J0 2220 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 PCDH15Q96QU1 1955 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 TSPAN2O60636 221 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 LINC00614P0C842 121 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 OMGP23515 440 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 OR1D4P47884 311 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 TLE3Q04726 772 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 PLCXD2Q0VAA5 305 aa12.95□□□□□ -0.34
UBAP1-202ENST00000359544 HLA-DQA1Q5Y7H0 255 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms