RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 EMC4Q5J8M3 183 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 MCEMP1Q8IX19 187 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 LGI3Q8N145 548 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 Q8N976 141 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 TMEM234Q8WY98 164 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 WDYHV1Q96HA8 205 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 REEP6Q96HR9 211 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 CYYR1Q96J86 154 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 REPIN1Q9BWE0 567 aaKnown RBP13.69□□□□□ -0.22
RTN3-205ENST00000356000 PRRT4C9JH25 899 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 SRSF10O75494 262 aaKnown RBP13.69□□□□□ -0.22
RTN3-205ENST00000356000 GRK6P43250 576 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 HYAL1Q12794 435 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 Q5PR19 223 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 FHL5Q5TD97 284 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 OTPQ5XKR4 325 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 RNF44Q7L0R7 432 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 CALHM1Q8IU99 346 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 ZNF547Q8IVP9 402 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 OR5AU1Q8NGC0 362 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 SLAMF6Q96DU3 332 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 C18orf12Q96KH6 178 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 LINC00615Q96LM1 132 aaPredicted RBP13.69□□□□□ -0.22
RTN3-205ENST00000356000 ZNF703Q9H7S9 590 aaPredicted RBP13.69□□□□□ -0.22
RTN3-205ENST00000356000 TP53TG3Q9ULZ0 132 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 LRP12Q9Y561 859 aa13.69□□□□□ -0.22
RTN3-205ENST00000356000 ZNF814B7Z6K7 855 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 MSTNO14793 375 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 PIAS2O75928 621 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 PSG1P11464 419 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 LINC00310P59036 64 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 NTHL1P78549 312 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 ARFRP1Q13795 201 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 RTP5Q14D33 572 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 PRAMEF20Q5VT98 475 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 ZNF787Q6DD87 383 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 KCTD18Q6PI47 426 aaPredicted RBP13.68□□□□□ -0.22
RTN3-205ENST00000356000 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.68□□□□□ -0.229e-7■■■■□ 25.5
RTN3-205ENST00000356000 CDRT4Q8N9R6 151 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 PINX1Q96BK5 328 aaKnown RBP13.68□□□□□ -0.22
RTN3-205ENST00000356000 LMF2Q9BU23 707 aaKnown RBP13.68□□□□□ -0.22
RTN3-205ENST00000356000 SLC35D1Q9NTN3 355 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 DECR2Q9NUI1 292 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 CDC42EP3Q9UKI2 254 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 HS3ST2Q9Y278 367 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 BRCA2P51587 3418 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 IGHV1-69-2A0A0G2JMI3 117 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 A0A1W2PRS3 328 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 KBTBD11O94819 623 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 IL3RAP26951 378 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 CD52P31358 61 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 TRIM61Q5EBN2 209 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 KCNIP4Q6PIL6 250 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 MARCH3Q86UD3 253 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 C20orf196Q8IYI0 205 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 ARHGEF39Q8N4T4 335 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 C8orf44Q96CB5 159 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 TSPAN32Q96QS1 320 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 PLEKHF2Q9H8W4 249 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 SOHLH2Q9NX45 425 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 CD207Q9UJ71 328 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 DOCK9Q9BZ29 2069 aa13.68□□□□□ -0.22
RTN3-205ENST00000356000 LRRC3CA6NJW4 275 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 HPNP05981 417 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 RIPPLY3P57055 190 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 TAS2R30P59541 319 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 TCTN1Q2MV58 587 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 OR5C1Q8NGR4 320 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 ZNF519Q8TB69 540 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 ARHGAP5-AS1Q96IT6 56 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 MEGF9Q9H1U4 602 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 R4GMQ9 66 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 CEBPZOSA8MTT3 80 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 BGLAPP02818 100 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 AADACP22760 399 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 TSPOP30536 169 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 SP6Q3SY56 376 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 S100A7AQ86SG5 101 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 MBD3L1Q8WWY6 194 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 SGCZQ96LD1 299 aa13.67□□□□□ -0.22
RTN3-205ENST00000356000 MPIG6BO95866 241 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 OMGP23515 440 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 ARL6IP1Q15041 203 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 MSMO1Q15800 293 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 MRGPRGQ86SM5 289 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 TMEM252Q8N6L7 170 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 DOK4Q8TEW6 326 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 LIPHQ8WWY8 451 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 BTF3L4Q96K17 158 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 SLC46A1Q96NT5 459 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 G6PC2Q9NQR9 355 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 ELOVL5Q9NYP7 299 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 EMC9Q9Y3B6 208 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 IGKV1D-42A0A075B6H8 117 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 CORTO00230 105 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 HLA-DQA2P01906 255 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 ID2Q02363 134 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 PRDX1Q06830 199 aaKnown RBP13.66□□□□□ -0.22
RTN3-205ENST00000356000 FAM3CQ92520 227 aa13.66□□□□□ -0.22
RTN3-205ENST00000356000 STARD4Q96DR4 205 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms