RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 CCL3P10147 92 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 MMP16P51512 607 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 DRAM2Q6UX65 266 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 CRIPAKQ8N1N5 446 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 OR13G1Q8NGZ3 307 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 GMPPAQ96IJ6 420 aaPredicted RBP10.81□□□□□ -0.68
COLCA1-201ENST00000355430 PATE4P0C8F1 98 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 RPS4XP62701 263 aaKnown RBP10.81□□□□□ -0.68
COLCA1-201ENST00000355430 OR5C1Q8NGR4 320 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 LHX4Q969G2 390 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 ARV1Q9H2C2 271 aa10.81□□□□□ -0.68
COLCA1-201ENST00000355430 PATZ1Q9HBE1 687 aaKnown RBP10.81□□□□□ -0.68
COLCA1-201ENST00000355430 J3QRE1 110 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 FGF2P09038 288 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 TMEM41BQ5BJD5 291 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 NTNG2Q96CW9 530 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 ANXA10Q9UJ72 324 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 VWA8A3KMH1 1905 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 IGLV1-36A0A0B4J1U3 117 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 K7ESF4 209 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 DEFA4P12838 97 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 ZNF658BQ4V348 819 aaPredicted RBP10.8□□□□□ -0.68
COLCA1-201ENST00000355430 PIPOXQ9P0Z9 390 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 IL13RA2Q14627 380 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 ADPRHL1Q8NDY3 354 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 ADAM19Q9H013 955 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 POMT1Q9Y6A1 747 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 A0A1W2PR80 420 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 SURF2Q15527 256 aaPredicted RBP10.8□□□□□ -0.68
COLCA1-201ENST00000355430 SPATA46Q5T0L3 261 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 SMIM7Q9BQ49 75 aa10.8□□□□□ -0.68
COLCA1-201ENST00000355430 AHRRA9YTQ3 701 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 MUC1P15941 1255 aaPredicted RBP10.79□□□□□ -0.68
COLCA1-201ENST00000355430 ZNF17P17021 662 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 ZNF32P17041 273 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 ROM1Q03395 351 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 H2BFWTQ7Z2G1 175 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 HDHD3Q9BSH5 251 aaPredicted RBP10.79□□□□□ -0.68
COLCA1-201ENST00000355430 ZNF98A6NK75 572 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 C17orf51A8MQB3 221 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 TNFAIP6P98066 277 aaPredicted RBP10.79□□□□□ -0.68
COLCA1-201ENST00000355430 OR2C3Q8N628 320 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 AQP3Q92482 292 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 A0A1W2PP11 408 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 HOGA1Q86XE5 327 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 ONECUT1Q9UBC0 465 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 WSB1Q9Y6I7 421 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 SPTBP11277 2137 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 A0A087WV48 116 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 KITLGP21583 273 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 NPBWR1P48145 328 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 C3AR1Q16581 482 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 NCMAPQ5T1S8 102 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 DYRK2Q92630 601 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 FOXJ2Q9P0K8 574 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 TAAR3PQ9P1P4 343 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 RAXQ9Y2V3 346 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 MTCL1Q9Y4B5 1905 aaKnown RBP10.79□□□□□ -0.68
COLCA1-201ENST00000355430 C7orf77A4D0Y5 90 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 OR8U8P0C7N1 319 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 RPS2P15880 293 aaKnown RBP10.79□□□□□ -0.68
COLCA1-201ENST00000355430 MPGP29372 298 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 EGR4Q05215 589 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 S1PR3Q99500 378 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 TUBG2Q9NRH3 451 aa10.79□□□□□ -0.68
COLCA1-201ENST00000355430 POLR2GP62487 172 aaKnown RBP eCLIP10.78□□□□□ -0.68
COLCA1-201ENST00000355430 ZNF705AQ6ZN79 300 aaPredicted RBP10.78□□□□□ -0.68
COLCA1-201ENST00000355430 OR10D4PQ8NGN7 298 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 OR13D1Q8NGV5 346 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 TMPRSS5Q9H3S3 457 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 HEYLQ9NQ87 328 aaPredicted RBP10.78□□□□□ -0.68
COLCA1-201ENST00000355430 LIN7CQ9NUP9 197 aaKnown RBP10.78□□□□□ -0.68
COLCA1-201ENST00000355430 ZNF391Q9UJN7 358 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 NCR3LG1Q68D85 454 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 UHRF2Q96PU4 802 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 NRIP2Q9BQI9 281 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 ARID1AO14497 2285 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 GBF1Q92538 1859 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 TERTO14746 1132 aaKnown RBP10.78□□□□□ -0.68
COLCA1-201ENST00000355430 LDLRAD3Q86YD5 345 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 UBALD1Q8TB05 177 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 CCL17Q92583 94 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 SCARF2Q96GP6 870 aaPredicted RBP10.78□□□□□ -0.68
COLCA1-201ENST00000355430 PARP11Q9NR21 331 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 RNF150Q9ULK6 438 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 UBE2L5PA0A1B0GUS4 154 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 MFNGO00587 321 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 GEMIN2O14893 280 aaKnown RBP10.78□□□□□ -0.68
COLCA1-201ENST00000355430 TSPAN2O60636 221 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 PDCD6O75340 191 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 FABP4P15090 132 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 LYZL2Q7Z4W2 148 aa10.78□□□□□ -0.68
COLCA1-201ENST00000355430 NLRC5Q86WI3 1866 aa10.77□□□□□ -0.68
COLCA1-201ENST00000355430 TRGV10A0A0A0MS01 117 aa10.77□□□□□ -0.68
COLCA1-201ENST00000355430 CDRT15L2A8MXV6 281 aa10.77□□□□□ -0.68
COLCA1-201ENST00000355430 ADAM11O75078 769 aa10.77□□□□□ -0.68
COLCA1-201ENST00000355430 LYPD3O95274 346 aa10.77□□□□□ -0.68
COLCA1-201ENST00000355430 IFI6P09912 130 aa10.77□□□□□ -0.68
COLCA1-201ENST00000355430 P2RY1P47900 373 aa10.77□□□□□ -0.68
COLCA1-201ENST00000355430 C1orf100Q5SVJ3 147 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms