RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RPL23AP62750 156 aaKnown RBP8.19□□□□□ -1.1
SMG6-202ENST00000354901 TMEM128Q5BJH2 165 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 DCAF10Q5QP82 559 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 TMEM268Q5VZI3 342 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 OPN5Q6U736 354 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 FAM57BQ71RH2 274 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 ANKRD37Q7Z713 158 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 PEG10Q86TG7 708 aaKnown RBP8.19□□□□□ -1.1
SMG6-202ENST00000354901 UEVLDQ8IX04 471 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 SLC22A24Q8N4F4 322 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 SPEM1Q8N4L4 309 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 OR5D14Q8NGL3 314 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 OR2G3Q8NGZ4 309 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 OR4X1Q8NH49 305 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 PRRX2Q99811 253 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 SLCO5A1Q9H2Y9 848 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 C5orf66Q9H5L9 145 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 GPR84Q9NQS5 396 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 FAM206AQ9NX38 181 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 ZNF319Q9P2F9 582 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 KLHL13Q9P2N7 655 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 GNG13Q9P2W3 67 aa8.19□□□□□ -1.1
SMG6-202ENST00000354901 A0A1W2PPQ1 181 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 C5orf63A6NC05 138 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 LIPT2A6NK58 231 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 NUDT21O43809 227 aaKnown RBP8.18□□□□□ -1.1
SMG6-202ENST00000354901 IL2RAP01589 272 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 TBPP20226 339 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 IQCJQ1A5X6 159 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 TMEM176BQ3YBM2 270 aaPredicted RBP8.18□□□□□ -1.1
SMG6-202ENST00000354901 C1orf100Q5SVJ3 147 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 TMEM183AQ8IXX5 376 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 UBALD2Q8IYN6 164 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 TMEM156Q8N614 296 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 TMEM217Q8N7C4 229 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 TOMM40LQ969M1 308 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 ADGRG7Q96K78 797 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 SLC26A1Q9H2B4 701 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 FKBP11Q9NYL4 201 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 PLA2G3Q9NZ20 509 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 AK3Q9UIJ7 227 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 TMED3Q9Y3Q3 217 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 SFT2D2O95562 160 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 CD55P08174 381 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 FGF5P12034 268 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 GLB1P16278 677 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 APOBEC1P41238 236 aaKnown RBP8.18□□□□□ -1.1
SMG6-202ENST00000354901 SLC6A9P48067 706 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 ZNF121P58317 390 aaPredicted RBP8.18□□□□□ -1.1
SMG6-202ENST00000354901 ADIRFQ15847 76 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 PRSS8Q16651 343 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 TMEM108Q6UXF1 575 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 CMTM1Q8IZ96 169 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 NKAIN3Q8N8D7 197 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 ZDHHC22Q8N966 263 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 ST8SIA1Q92185 356 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 AQP3Q92482 292 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 CLDN23Q96B33 292 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 ZNF385AQ96PM9 386 aaKnown RBP8.18□□□□□ -1.1
SMG6-202ENST00000354901 FUT9Q9Y231 359 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 MRPS28Q9Y2Q9 187 aaKnown RBP8.18□□□□□ -1.1
SMG6-202ENST00000354901 LHFPL6Q9Y693 200 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 FREM2Q5SZK8 3169 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 ZDBF2Q9HCK1 2354 aa8.18□□□□□ -1.1
SMG6-202ENST00000354901 TMEM210A6NLX4 147 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 ZNF878C9JN71 531 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 F5H5K5 113 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 TP53I11O14683 189 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 TAAR5O14804 337 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 METTL15P1P0C7V9 234 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 CHRNB4P30926 498 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 RAB7AP51149 207 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 SSBP1Q04837 148 aaKnown RBP8.17□□□□□ -1.1
SMG6-202ENST00000354901 OR5H2Q8NGV7 314 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 LIN37Q96GY3 246 aaPredicted RBP8.17□□□□□ -1.1
SMG6-202ENST00000354901 ZNF2Q9BSG1 426 aaPredicted RBP8.17□□□□□ -1.1
SMG6-202ENST00000354901 WFDC1Q9HC57 220 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 ZNF701Q9NV72 531 aaPredicted RBP8.17□□□□□ -1.1
SMG6-202ENST00000354901 EHFQ9NZC4 300 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 B3GAT1Q9P2W7 334 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 SLC7A11Q9UPY5 501 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 IGHV3-15A0A0B4J1V0 119 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 SCRG1O75711 98 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 IGHMP01871 453 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 ISG15P05161 165 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 LINC00614P0C842 121 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 TAS2R31P59538 309 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 SRSF4Q08170 494 aaKnown RBP8.17□□□□□ -1.1
SMG6-202ENST00000354901 SLC25A24Q6NUK1 477 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 OR8B12Q8NGG6 310 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 MRPL24Q96A35 216 aaKnown RBP8.17□□□□□ -1.1
SMG6-202ENST00000354901 TMEM230Q96A57 120 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 GINS3Q9BRX5 216 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 GLRX2Q9NS18 164 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 RBM7Q9Y580 266 aaKnown RBP8.17□□□□□ -1.1
SMG6-202ENST00000354901 V9GYS6 101 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 CPAMD8Q8IZJ3 1885 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 KNTC1P50748 2209 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 TRBV6-7A0A0A0MS04 114 aa8.17□□□□□ -1.1
SMG6-202ENST00000354901 ZNF320A2RRD8 509 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms