RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TMEM41BQ5BJD5 291 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 CYP2G1PQ6ZSU1 146 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 ODF3L1Q8IXM7 274 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 OR5AS1Q8N127 324 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 C12orf76Q8N812 135 aaPredicted RBP11.52□□□□□ -0.57
IFT88-202ENST00000351808 ZNF738Q8NE65 137 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 OR11L1Q8NGX0 322 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 WWTR1Q9GZV5 400 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 VSIRQ9H7M9 311 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 MCTS1Q9ULC4 181 aaKnown RBP11.52□□□□□ -0.57
IFT88-202ENST00000351808 DOCK11Q5JSL3 2073 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 DNAH14Q0VDD8 3507 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 CDS2O95674 445 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 ZNF728P0DKX0 622 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 SMIM10L1P0DMW3 83 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 CLDN17P56750 224 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 RPL27P61353 136 aaKnown RBP11.52□□□□□ -0.57
IFT88-202ENST00000351808 ZNF154Q13106 437 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 FBLN7Q53RD9 439 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 CENPVQ7Z7K6 275 aaPredicted RBP11.52□□□□□ -0.57
IFT88-202ENST00000351808 SMIM10Q96HG1 83 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 SLC46A2Q9BY10 475 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 S1PR5Q9H228 398 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 PATZ1Q9HBE1 687 aaKnown RBP11.52□□□□□ -0.57
IFT88-202ENST00000351808 COX11Q9Y6N1 276 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 MYO7BQ6PIF6 2116 aa11.52□□□□□ -0.57
IFT88-202ENST00000351808 ZNF320A2RRD8 509 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 SHISA7A6NL88 538 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 PHF1O43189 567 aaPredicted RBP11.51□□□□□ -0.57
IFT88-202ENST00000351808 NXPH3O95157 252 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 HOXB2P14652 356 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 NKX2-1P43699 371 aaPredicted RBP11.51□□□□□ -0.57
IFT88-202ENST00000351808 MTCP1P56278 107 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 TAS2R30P59541 319 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 ARL6IP1Q15041 203 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 TCEA2Q15560 299 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 LY6G5CQ5SRR4 150 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 TMPRSS7Q7RTY8 843 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 C1QL2Q7Z5L3 287 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 COMMD2Q86X83 199 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 ZNF321PQ8N8H1 164 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 OR51E1Q8TCB6 317 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 APH1AQ96BI3 265 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 TBL1XR1Q9BZK7 514 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 NKX2-4Q9H2Z4 354 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 ZNF160Q9HCG1 818 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 A0A0U1RQV5 110 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 A0A1W2PQ45 241 aaPredicted RBP11.51□□□□□ -0.57
IFT88-202ENST00000351808 A0A1W2PQY0 241 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 GPR89AB7ZAQ6 455 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 TYMSP04818 313 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 GPR89BP0CG08 455 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 RPS15AP62244 130 aaKnown RBP11.51□□□□□ -0.57
IFT88-202ENST00000351808 LDLRAD2Q5SZI1 272 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 LRTM2Q8N967 370 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 OR5T1Q8NG75 326 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 IRF7Q92985 503 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 P2RX4Q99571 388 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 TXN2Q99757 166 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 PBOV1Q9GZY1 135 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 HIPK2Q9H2X6 1198 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 FAM206AQ9NX38 181 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 WIPI2Q9Y4P8 454 aa11.51□□□□□ -0.57
IFT88-202ENST00000351808 LOC102724200A0A096LPH7 203 aaPredicted RBP11.5□□□□□ -0.57
IFT88-202ENST00000351808 CYR61O00622 381 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 IL3RAP26951 378 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 HINT1P49773 126 aaPredicted RBP11.5□□□□□ -0.57
IFT88-202ENST00000351808 RRADP55042 308 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 MLF1P58340 268 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 UBE2G2P60604 165 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 UBE2NP61088 152 aaKnown RBP11.5□□□□□ -0.57
IFT88-202ENST00000351808 ZNF726P1Q15940 193 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 CXorf66Q5JRM2 361 aaPredicted RBP11.5□□□□□ -0.57
IFT88-202ENST00000351808 AGBL4Q5VU57 503 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 Q6ZN92 141 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 C6orf201Q7Z4U5 140 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 HOXB13Q92826 284 aaPredicted RBP11.5□□□□□ -0.57
IFT88-202ENST00000351808 ZNF845Q96IR2 970 aaPredicted RBP11.5□□□□□ -0.57
IFT88-202ENST00000351808 RAB11FIP5Q9BXF6 653 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 LYRM2Q9NU23 88 aaPredicted RBP11.5□□□□□ -0.57
IFT88-202ENST00000351808 HEBP2Q9Y5Z4 205 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 A0A0U1RQK1 487 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 F6UZH7 168 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 TMEM50AO95807 157 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 TPPP2P59282 170 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 RPL15P61313 204 aaKnown RBP11.5□□□□□ -0.57
IFT88-202ENST00000351808 RPL19P84098 196 aaKnown RBP11.5□□□□□ -0.57
IFT88-202ENST00000351808 FMODQ06828 376 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 FAM57BQ71RH2 274 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 ZNF519Q8TB69 540 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 VSTM2LQ96N03 204 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 RSG1Q9BU20 258 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 SLC2A9Q9NRM0 540 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 DECR2Q9NUI1 292 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 SLC45A2Q9UMX9 530 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 IGHV2-70DA0A0C4DH43 119 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 ZNF850A8MQ14 1090 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 LILRB3O75022 631 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 SEMA4FO95754 770 aa11.5□□□□□ -0.57
IFT88-202ENST00000351808 COMPP49747 757 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms