RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SEMA5BQ9P283 1151 aa8.97□□□□□ -0.97
CHRNA1-202ENST00000348749 THADAQ6YHU6 1953 aa8.96□□□□□ -0.97
CHRNA1-202ENST00000348749 IGKV1-9A0A0C4DH69 117 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 MMP7P09237 267 aaPredicted RBP8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 HLA-DOBP13765 273 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 MMP9P14780 707 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 ZNF17P17021 662 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 ZNF133P52736 654 aaPredicted RBP8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 UCP3P55916 312 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 TAS2R30P59541 319 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 C1orf61Q13536 156 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 COTL1Q14019 142 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 ACTL10Q5JWF8 245 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 C9orf50Q5SZB4 431 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 CRIP3Q6Q6R5 217 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 P4HA3Q7Z4N8 544 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 ABHD12BQ7Z5M8 362 aaPredicted RBP8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 OR8B12Q8NGG6 310 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 OR2AJ1Q8NGZ0 328 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 MRPL13Q9BYD1 178 aaKnown RBP8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 LPAR2Q9HBW0 351 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 SLC2A9Q9NRM0 540 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 GNG13Q9P2W3 67 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 LAMP3Q9UQV4 416 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 PHF3Q92576 2039 aaKnown RBP8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 YLPM1P49750 1951 aaKnown RBP8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 F5P12259 2224 aa8.96□□□□□ -0.98
CHRNA1-202ENST00000348749 IGHV5-51A0A0C4DH38 117 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 FAM221AA4D161 298 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 A6NNC1 897 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 MSTNO14793 375 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 TMEM225BP0DP42 221 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 FBLP22087 321 aaKnown RBP8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 NKX2-1P43699 371 aaPredicted RBP8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 RPL29P47914 159 aaKnown RBP8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 GNG10P50151 68 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 SRPXP78539 464 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 POU3F1Q03052 451 aaPredicted RBP8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 ACSF3Q4G176 576 aaPredicted RBP8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 ZNF542PQ5EBM4 170 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 SLC25A53Q5H9E4 307 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 SAPCD1Q5SSQ6 148 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 D2HGDHQ8N465 521 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 OR51G1Q8NGK1 321 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 OR5C1Q8NGR4 320 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 TOMM40LQ969M1 308 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 THOC3Q96J01 351 aaKnown RBP8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 FAAP24Q9BTP7 215 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 NKX2-4Q9H2Z4 354 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 GLRX2Q9NS18 164 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 NAT8Q9UHE5 227 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 NAGKQ9UJ70 344 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 A0A1W2PPC4 97 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 LIPT2A6NK58 231 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 VSTM2BA6NLU5 285 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 PROB1E7EW31 1015 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 WISP1O95388 367 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 TYMSP04818 313 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 EN2P19622 333 aaPredicted RBP8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 GZMHP20718 246 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 DTYMKP23919 212 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 CTSSP25774 331 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 BRS3P32247 399 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 DYNLT3P51808 116 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 ELLP55199 621 aaPredicted RBP8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 GRB2P62993 217 aaKnown RBP8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 KISS1Q15726 138 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 NSDHLQ15738 373 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 WDR25Q64LD2 544 aaPredicted RBP8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 NCR3LG1Q68D85 454 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 C16orf82Q7Z2V1 217 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 C6orf201Q7Z4U5 140 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 C1QL2Q7Z5L3 287 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 COMMD2Q86X83 199 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 ODF3L1Q8IXM7 274 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 ZNF100Q8IYN0 542 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 TMEM123Q8N131 208 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 CCDC71LQ8N9Z2 235 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 RNF138Q8WVD3 245 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 HLA-CQ95604 372 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 C10orf35Q96D05 121 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 ATP5SQ99766 215 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 SPIN2AQ99865 258 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 SPIN2BQ9BPZ2 258 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 C20orf144Q9BQM9 153 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 PCED1AQ9H1Q7 454 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 IGFLR1Q9H665 355 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 Q9N2K0 584 aa8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 PTRH2Q9Y3E5 179 aaKnown RBP8.95□□□□□ -0.98
CHRNA1-202ENST00000348749 EXPH5Q8NEV8 1989 aa8.94□□□□□ -0.98
CHRNA1-202ENST00000348749 PCNX3Q9H6A9 2034 aa8.94□□□□□ -0.98
CHRNA1-202ENST00000348749 SCGB1D1O95968 90 aa8.94□□□□□ -0.98
CHRNA1-202ENST00000348749 IGHG1P01857 330 aa8.94□□□□□ -0.98
CHRNA1-202ENST00000348749 CD55P08174 381 aa8.94□□□□□ -0.98
CHRNA1-202ENST00000348749 IL6RP08887 468 aaPredicted RBP8.94□□□□□ -0.98
CHRNA1-202ENST00000348749 VAMP2P63027 116 aa8.94□□□□□ -0.98
CHRNA1-202ENST00000348749 RUNX1Q01196 453 aa8.94□□□□□ -0.98
CHRNA1-202ENST00000348749 TFF2Q03403 129 aa8.94□□□□□ -0.98
CHRNA1-202ENST00000348749 TSPO2Q5TGU0 170 aa8.94□□□□□ -0.98
CHRNA1-202ENST00000348749 DMRTA1Q5VZB9 504 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms