RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ZNF2Q9BSG1 426 aaPredicted RBP11.47□□□□□ -0.57
CDC42-202ENST00000344548 CXXC4Q9H2H0 198 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 IGLV3-9A0A075B6K5 115 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 A6NLC8 198 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 CCL21O00585 134 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 ABCD4O14678 606 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 NXPH2O95156 264 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 OR2H2O95918 312 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 RCC1P18754 421 aaPredicted RBP11.47□□□□□ -0.57
CDC42-202ENST00000344548 TUBG1P23258 451 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 MRPS15P82914 257 aaKnown RBP11.47□□□□□ -0.57
CDC42-202ENST00000344548 BSPH1Q075Z2 132 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 TMEM211Q6ICI0 200 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 GRPEL2Q8TAA5 225 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 PLPPR1Q8TBJ4 325 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 NEK7Q8TDX7 302 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 DPCDQ9BVM2 203 aaPredicted RBP11.47□□□□□ -0.57
CDC42-202ENST00000344548 MYOZ1Q9NP98 299 aaPredicted RBP11.47□□□□□ -0.57
CDC42-202ENST00000344548 TUBG2Q9NRH3 451 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 EDARQ9UNE0 448 aa11.47□□□□□ -0.57
CDC42-202ENST00000344548 NOP16Q9Y3C1 178 aaKnown RBP11.47□□□□□ -0.57
CDC42-202ENST00000344548 C9orf170A2RU37 121 aa11.46□□□□□ -0.57
CDC42-202ENST00000344548 NKX2-6A6NCS4 301 aa11.46□□□□□ -0.57
CDC42-202ENST00000344548 TMEM210A6NLX4 147 aa11.46□□□□□ -0.57
CDC42-202ENST00000344548 SUPT4H1P63272 117 aaKnown RBP11.46□□□□□ -0.57
CDC42-202ENST00000344548 ADORA2A-AS1P86434 159 aa11.46□□□□□ -0.57
CDC42-202ENST00000344548 HERPUD1Q15011 391 aa11.46□□□□□ -0.57
CDC42-202ENST00000344548 LY6G6FQ5SQ64 297 aa11.46□□□□□ -0.57
CDC42-202ENST00000344548 TLNRD1Q9H1K6 362 aa11.46□□□□□ -0.57
CDC42-202ENST00000344548 HES4Q9HCC6 221 aa11.46□□□□□ -0.57
CDC42-202ENST00000344548 Q9N2K0 584 aa11.46□□□□□ -0.57
CDC42-202ENST00000344548 SLC23A1Q9UHI7 598 aa11.46□□□□□ -0.57
CDC42-202ENST00000344548 POLDIP2Q9Y2S7 368 aa11.46□□□□□ -0.57
CDC42-202ENST00000344548 KIAA2026Q5HYC2 2103 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 IGKV1-6A0A0C4DH72 117 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 MCRIP1C9JLW8 97 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 H3BUI4 141 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 SLC33A1O00400 549 aaPredicted RBP11.46□□□□□ -0.58
CDC42-202ENST00000344548 CCSO14618 274 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 GOSR2O14653 212 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 DEGS1O15121 323 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 SPRY3O43610 288 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 PSPNO60542 156 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 PTBP3O95758 552 aaKnown RBP11.46□□□□□ -0.58
CDC42-202ENST00000344548 NFYAP23511 347 aaPredicted RBP11.46□□□□□ -0.58
CDC42-202ENST00000344548 PMELP40967 661 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 KLF3P57682 345 aaPredicted RBP11.46□□□□□ -0.58
CDC42-202ENST00000344548 SNRPD2P62316 118 aaKnown RBP11.46□□□□□ -0.58
CDC42-202ENST00000344548 IL13RA2Q14627 380 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 SPICQ8N5J4 248 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 POC1AQ8NBT0 407 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 OR5T2Q8NGG2 359 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 MRPL30Q8TCC3 161 aaKnown RBP11.46□□□□□ -0.58
CDC42-202ENST00000344548 CASTOR1Q8WTX7 329 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 POM121Q96HA1 1249 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 PLK3Q9H4B4 646 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 CHMP1AQ9HD42 196 aaPredicted RBP11.46□□□□□ -0.58
CDC42-202ENST00000344548 OR14J1Q9UGF5 321 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 METRNQ9UJH8 293 aa11.46□□□□□ -0.58
CDC42-202ENST00000344548 FAM172BPA6NC97 362 aa11.45□□□□□ -0.58
CDC42-202ENST00000344548 FAM90A27PA6NNH2 459 aa11.45□□□□□ -0.58
CDC42-202ENST00000344548 EGR1P18146 543 aa11.45□□□□□ -0.58
CDC42-202ENST00000344548 VAMP1P23763 118 aa11.45□□□□□ -0.58
CDC42-202ENST00000344548 ZNF146Q15072 292 aa11.45□□□□□ -0.58
CDC42-202ENST00000344548 ADAM5Q6NVV9 412 aa11.45□□□□□ -0.58
CDC42-202ENST00000344548 LYG2Q86SG7 212 aa11.45□□□□□ -0.58
CDC42-202ENST00000344548 TGIF2LYQ8IUE0 185 aa11.45□□□□□ -0.58
CDC42-202ENST00000344548 ZCCHC24Q8N2G6 241 aaKnown RBP11.45□□□□□ -0.58
CDC42-202ENST00000344548 C12orf45Q8N5I9 185 aaPredicted RBP11.45□□□□□ -0.58
CDC42-202ENST00000344548 OR2T35Q8NGX2 323 aa11.45□□□□□ -0.58
CDC42-202ENST00000344548 CCDC107Q8WV48 283 aa11.45□□□□□ -0.58
CDC42-202ENST00000344548 C1orf123Q9NWV4 160 aa11.45□□□□□ -0.58
CDC42-202ENST00000344548 TAAR3PQ9P1P4 343 aa11.45□□□□□ -0.58
CDC42-202ENST00000344548 HIVEP3Q5T1R4 2406 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.44□□□□□ -0.58
CDC42-202ENST00000344548 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.44□□□□□ -0.58
CDC42-202ENST00000344548 NOS1APO75052 506 aaPredicted RBP11.44□□□□□ -0.58
CDC42-202ENST00000344548 OR2A4O95047 310 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 RPS2P15880 293 aaKnown RBP11.44□□□□□ -0.58
CDC42-202ENST00000344548 FCGR2CP31995 323 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 IL13RA1P78552 427 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 GRK1Q15835 563 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 DHRS11Q6UWP2 260 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 TMEM108Q6UXF1 575 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 UBALD1Q8TB05 177 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 ELMOD3Q96FG2 381 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 OR2V2Q96R30 315 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 OR2A7Q96R45 310 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 ZNF286AQ9HBT8 521 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 hCG_1807616A0A1W2PRN6 198 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 SLC22A5O76082 557 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 KNG1P01042 644 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 FPR2P25090 351 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 FXYD4P59646 89 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 DHODHQ02127 395 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 ATXN7L3Q14CW9 347 aaPredicted RBP11.44□□□□□ -0.58
CDC42-202ENST00000344548 FAM201AQ5SY85 155 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 C1orf174Q8IYL3 243 aa11.44□□□□□ -0.58
CDC42-202ENST00000344548 ZBTB8BQ8NAP8 495 aaPredicted RBP11.44□□□□□ -0.58
CDC42-202ENST00000344548 NEUROG1Q92886 237 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms