RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 UCP3P55916 312 aa18.36■□□□□ 0.53
CCDC38-201ENST00000344280 HERV-K104P61576 105 aa18.36■□□□□ 0.53
CCDC38-201ENST00000344280 TSC22D1Q15714 1073 aa18.36■□□□□ 0.53
CCDC38-201ENST00000344280 C10orf91Q5T1B1 145 aa18.36■□□□□ 0.53
CCDC38-201ENST00000344280 CTRB2Q6GPI1 263 aa18.36■□□□□ 0.53
CCDC38-201ENST00000344280 IL34Q6ZMJ4 242 aa18.36■□□□□ 0.53
CCDC38-201ENST00000344280 SVBPQ8N300 66 aa18.36■□□□□ 0.53
CCDC38-201ENST00000344280 SLC35G3Q8N808 338 aa18.36■□□□□ 0.53
CCDC38-201ENST00000344280 APOBEC3DQ96AK3 386 aaPredicted RBP18.36■□□□□ 0.53
CCDC38-201ENST00000344280 SAT2Q96F10 170 aaPredicted RBP18.36■□□□□ 0.53
CCDC38-201ENST00000344280 WFDC1Q9HC57 220 aa18.36■□□□□ 0.53
CCDC38-201ENST00000344280 ABI3Q9P2A4 366 aa18.36■□□□□ 0.53
CCDC38-201ENST00000344280 ZFHX4Q86UP3 3567 aa18.35■□□□□ 0.53
CCDC38-201ENST00000344280 SULT1A2P50226 295 aa18.35■□□□□ 0.53
CCDC38-201ENST00000344280 FGF12P61328 243 aa18.35■□□□□ 0.53
CCDC38-201ENST00000344280 ZNF488Q96MN9 340 aa18.35■□□□□ 0.53
CCDC38-201ENST00000344280 C12orf49Q9H741 205 aa18.35■□□□□ 0.53
CCDC38-201ENST00000344280 ZNF724A8MTY0 619 aa18.35■□□□□ 0.53
CCDC38-201ENST00000344280 EIF5AP63241 154 aaKnown RBP18.35■□□□□ 0.53
CCDC38-201ENST00000344280 HERPUD1Q15011 391 aa18.35■□□□□ 0.53
CCDC38-201ENST00000344280 HIKESHIQ53FT3 197 aa18.35■□□□□ 0.53
CCDC38-201ENST00000344280 SYT3Q9BQG1 590 aa18.35■□□□□ 0.53
CCDC38-201ENST00000344280 AIFM2Q9BRQ8 373 aa18.35■□□□□ 0.53
CCDC38-201ENST00000344280 R4GN57 208 aa18.35■□□□□ 0.53
CCDC38-201ENST00000344280 TNRC6AQ8NDV7 1962 aaKnown RBP18.34■□□□□ 0.53
CCDC38-201ENST00000344280 E5RGE8 158 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 JTBO76095 146 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 GAPDHP04406 335 aaKnown RBP18.34■□□□□ 0.53
CCDC38-201ENST00000344280 PMELP40967 661 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 CAV2P51636 162 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 LGI3Q8N145 548 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 CLRN3Q8NCR9 226 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 Q9N2K0 584 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 NSG2Q9Y328 171 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 MPPED1O15442 326 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 NAPSAO96009 420 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 SP1P08047 785 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 WNT5AP41221 380 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 PLA2G2CQ5R387 149 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 EIF5AL1Q6IS14 154 aaKnown RBP18.34■□□□□ 0.53
CCDC38-201ENST00000344280 VASH2Q86V25 355 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 CBLN2Q8IUK8 224 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 USB1Q9BQ65 265 aaKnown RBP18.34■□□□□ 0.53
CCDC38-201ENST00000344280 CARHSP1Q9Y2V2 147 aaKnown RBP18.34■□□□□ 0.53
CCDC38-201ENST00000344280 ARHGAP21Q5T5U3 1957 aa18.34■□□□□ 0.53
CCDC38-201ENST00000344280 C3orf85A0A1B0GTC6 90 aa18.33■□□□□ 0.53
CCDC38-201ENST00000344280 NUDT19A8MXV4 375 aa18.33■□□□□ 0.53
CCDC38-201ENST00000344280 COX5BP10606 129 aa18.33■□□□□ 0.53
CCDC38-201ENST00000344280 BTNL8Q6UX41 500 aa18.33■□□□□ 0.53
CCDC38-201ENST00000344280 FBXW12Q6X9E4 464 aa18.33■□□□□ 0.53
CCDC38-201ENST00000344280 PLEKHA2Q9HB19 425 aa18.33■□□□□ 0.53
CCDC38-201ENST00000344280 IGKV1D-13A0A0B4J2D9 117 aa18.33■□□□□ 0.52
CCDC38-201ENST00000344280 CD300LBA8K4G0 201 aa18.33■□□□□ 0.52
CCDC38-201ENST00000344280 C9JQL5 133 aa18.33■□□□□ 0.52
CCDC38-201ENST00000344280 TNFSF15O95150 251 aa18.33■□□□□ 0.52
CCDC38-201ENST00000344280 IGKV1-13P0DP09 117 aa18.33■□□□□ 0.52
CCDC38-201ENST00000344280 ESPL1Q14674 2120 aa18.33■□□□□ 0.52
CCDC38-201ENST00000344280 Q6ZRG5 221 aa18.33■□□□□ 0.52
CCDC38-201ENST00000344280 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.33■□□□□ 0.52
CCDC38-201ENST00000344280 DMBX1Q8NFW5 382 aa18.33■□□□□ 0.52
CCDC38-201ENST00000344280 SECTM1Q8WVN6 248 aa18.33■□□□□ 0.52
CCDC38-201ENST00000344280 NRIP2Q9BQI9 281 aa18.33■□□□□ 0.52
CCDC38-201ENST00000344280 DEFB127Q9H1M4 99 aa18.33■□□□□ 0.52
CCDC38-201ENST00000344280 PLSCR2Q9NRY7 297 aa18.33■□□□□ 0.52
CCDC38-201ENST00000344280 PURGQ9UJV8 347 aaKnown RBP18.33■□□□□ 0.52
CCDC38-201ENST00000344280 IGKV1-6A0A0C4DH72 117 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 M0R296 226 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 NME2P1O60361 137 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 IL18BPO95998 194 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 NPBWR1P48145 328 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 KCNJ3P48549 501 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 NHLH2Q02577 135 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 HAGHLQ6PII5 290 aaPredicted RBP18.32■□□□□ 0.52
CCDC38-201ENST00000344280 C20orf204Q6ZNR8 217 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 ZNF818PQ6ZRF7 136 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 UBAC2Q8NBM4 344 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 MDS2Q8NDY4 140 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 RCC2Q9P258 522 aaKnown RBP18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A10PA6NDY2 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A18PA6NE21 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A16PA6NEW6 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A20PA6NIJ5 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A8PA6NJQ4 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A7PA6NKC0 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A22PA8MWA6 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A12PA8MX19 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A5PA8MXJ8 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A23PA8MXZ1 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 OR8U9P0C7N5 309 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A15PP0C7V4 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A13PP0C7W8 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A14PP0C7W9 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 FAM90A24PP0C7X0 464 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 RNFT1Q5M7Z0 435 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 TBC1D26Q86UD7 250 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 CCDC71LQ8N9Z2 235 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 OR8U1Q8NH10 309 aa18.32■□□□□ 0.52
CCDC38-201ENST00000344280 RCL1Q9Y2P8 373 aaKnown RBP18.32■□□□□ 0.52
CCDC38-201ENST00000344280 NKX2-6A6NCS4 301 aa18.31■□□□□ 0.52
CCDC38-201ENST00000344280 PCNX2A6NKB5 2137 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms