RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 GPR61Q9BZJ8 451 aa12.45□□□□□ -0.42
LINC01116-202ENST00000339037 IMPAD1Q9NX62 359 aa12.45□□□□□ -0.42
LINC01116-202ENST00000339037 FAM172BPA6NC97 362 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 SH2D7A6NKC9 451 aaPredicted RBP12.44□□□□□ -0.42
LINC01116-202ENST00000339037 E9PQ18 207 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 M0QZK8 103 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 SIRPB1O00241 398 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 ENTPD6O75354 484 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 IGLV1-47P01700 117 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 AMY1AP04745 511 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 AMY2AP04746 511 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 UBCP0CG48 685 aaKnown RBP12.44□□□□□ -0.42
LINC01116-202ENST00000339037 CALCBP10092 127 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 PRKACAP17612 351 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 BCL3P20749 454 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 HOXD3P31249 432 aaPredicted RBP12.44□□□□□ -0.42
LINC01116-202ENST00000339037 CEACAM3P40198 252 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 ATP1B3P54709 279 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 ZIK1Q3SY52 487 aaPredicted RBP12.44□□□□□ -0.42
LINC01116-202ENST00000339037 OSR2Q8N2R0 312 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 LINC00482Q8N8I6 264 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 DNAAF1Q8NEP3 725 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 CREB3L1Q96BA8 519 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 ADAT3Q96EY9 351 aaPredicted RBP12.44□□□□□ -0.42
LINC01116-202ENST00000339037 HRASLS5Q96KN8 279 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 AASSQ9UDR5 926 aa12.44□□□□□ -0.42
LINC01116-202ENST00000339037 IGKV1-9A0A0C4DH69 117 aa12.43□□□□□ -0.42
LINC01116-202ENST00000339037 FUOMA2VDF0 154 aa12.43□□□□□ -0.42
LINC01116-202ENST00000339037 J3QRE1 110 aa12.43□□□□□ -0.42
LINC01116-202ENST00000339037 TOR1AO14656 332 aa12.43□□□□□ -0.42
LINC01116-202ENST00000339037 MTCP1P56278 107 aa12.43□□□□□ -0.42
LINC01116-202ENST00000339037 NANOS3P60323 173 aaKnown RBP12.43□□□□□ -0.42
LINC01116-202ENST00000339037 KPNB1Q14974 876 aaKnown RBP12.43□□□□□ -0.42
LINC01116-202ENST00000339037 C9orf152Q5JTZ5 239 aa12.43□□□□□ -0.42
LINC01116-202ENST00000339037 CCDC144NLQ6NUI1 221 aa12.43□□□□□ -0.42
LINC01116-202ENST00000339037 OR2G2Q8NGZ5 317 aa12.43□□□□□ -0.42
LINC01116-202ENST00000339037 TRUB1Q8WWH5 349 aaKnown RBP12.43□□□□□ -0.42
LINC01116-202ENST00000339037 RNFT2Q96EX2 444 aa12.43□□□□□ -0.42
LINC01116-202ENST00000339037 EXOSC4Q9NPD3 245 aaKnown RBP12.43□□□□□ -0.42
LINC01116-202ENST00000339037 PCDHGB5Q9Y5G0 923 aa12.43□□□□□ -0.42
LINC01116-202ENST00000339037 BUB1B-PAK6H3BSN5 160 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 SH2D1BO14796 132 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 OR2H2O95918 312 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 PRKACBP22694 351 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 CD34P28906 385 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 MNDAP41218 407 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 PTGFRP43088 359 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 HLA-DRB5Q30154 266 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 TPTE2P1Q5T6R2 138 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 MRPL41Q8IXM3 137 aaKnown RBP12.42□□□□□ -0.42
LINC01116-202ENST00000339037 OR51D1Q8NGF3 324 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 OR10AC1Q8NH08 325 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 MBOAT4Q96T53 435 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 B9D2Q9BPU9 175 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 ZNF649Q9BS31 505 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 ZNF286AQ9HBT8 521 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 HMG20AQ9NP66 347 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 TAS2R3Q9NYW6 316 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 FRRS1LQ9P0K9 344 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 HHLA2Q9UM44 414 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 GSTK1Q9Y2Q3 226 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 ORC6Q9Y5N6 252 aa12.42□□□□□ -0.42
LINC01116-202ENST00000339037 DAPL1A0PJW8 107 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 ODAMA1E959 279 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 PSMB11A5LHX3 300 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 SLC16A6O15403 523 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 FAM106CPP0CH98 169 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 GLIPR1P48060 266 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 ALDH3A2P51648 485 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 SNRPGP62308 76 aaKnown RBP12.41□□□□□ -0.42
LINC01116-202ENST00000339037 AESQ08117 197 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 PDZK1IP1Q13113 114 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 RBM39Q14498 530 aaKnown RBP12.41□□□□□ -0.42
LINC01116-202ENST00000339037 SLC25A30Q5SVS4 291 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 TMEM244Q5VVB8 128 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 FDX2Q6P4F2 183 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 LHFPL2Q6ZUX7 228 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 CBR4Q8N4T8 237 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 OR4D6Q8NGJ1 314 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 OR51A4Q8NGJ6 313 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 CORO2AQ92828 525 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 SPSB1Q96BD6 273 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 WWC2-AS2Q96NR7 200 aa12.41□□□□□ -0.42
LINC01116-202ENST00000339037 OOSP1A8MZH6 123 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 ISG15P05161 165 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 HTR1AP08908 422 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 OCM2P0CE71 109 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 OCMP0CE72 109 aaPredicted RBP12.4□□□□□ -0.42
LINC01116-202ENST00000339037 ZNF20P17024 532 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 GDNFP39905 211 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 OR3A4PP47883 348 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 PRRX1P54821 245 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 DCTN2Q13561 401 aaKnown RBP12.4□□□□□ -0.42
LINC01116-202ENST00000339037 MEDAGQ5VYS4 303 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 ETV3LQ6ZN32 361 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 UTS2BQ765I0 119 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 RNF144BQ7Z419 303 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 ZNF329Q86UD4 541 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 FGGYQ96C11 551 aa12.4□□□□□ -0.42
LINC01116-202ENST00000339037 LGALS12Q96DT0 336 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms