RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 IGHEP01854 428 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 GLP1RP43220 463 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 TGIF1Q15583 401 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 OR8B8Q15620 311 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 SVBPQ8N300 66 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 TAAR9Q96RI9 348 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 STRADBQ9C0K7 418 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 MTCH1Q9NZJ7 389 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 MED12LQ86YW9 2145 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 DNPH1O43598 174 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 PPYP01298 95 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 SELEP16581 610 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 EDARQ9UNE0 448 aa12.76□□□□□ -0.37
UBA1-201ENST00000335972 IGKV1D-13A0A0B4J2D9 117 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 SFTA3P0C7M3 94 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 IGKV1-13P0DP09 117 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 PPT1P50897 306 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 IZUMO4Q1ZYL8 232 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 AKR1E2Q96JD6 320 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 C20orf24Q9BUV8 137 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 PCDHB16Q9NRJ7 776 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 DNAJB11Q9UBS4 358 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 CEP250Q9BV73 2442 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 ARGFXA6NJG6 315 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 SYNGR4O95473 234 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 DTYMKP23919 212 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 PPA1Q15181 289 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 LIAT1Q6ZQX7 453 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 ZNF100Q8IYN0 542 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 FAM173AQ9BQD7 235 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 C1QTNF5Q9BXJ0 243 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 MEX3AA1L020 520 aaKnown RBP12.75□□□□□ -0.37
UBA1-201ENST00000335972 FAM24AA6NFZ4 105 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 RNASEK-C17orf49H0YIS7 233 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 POLR2GP62487 172 aaKnown RBP eCLIP12.75□□□□□ -0.37
UBA1-201ENST00000335972 SWI5Q1ZZU3 235 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 KRTAP27-1Q3LI81 207 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 DCAF10Q5QP82 559 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 RIPPLY2Q5TAB7 128 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 RTL6Q6ICC9 239 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 MSI2Q96DH6 328 aaKnown RBP12.75□□□□□ -0.37
UBA1-201ENST00000335972 NRIP2Q9BQI9 281 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 ESRP2Q9H6T0 727 aaKnown RBP12.75□□□□□ -0.37
UBA1-201ENST00000335972 GVINP1Q7Z2Y8 2422 aa12.75□□□□□ -0.37
UBA1-201ENST00000335972 PRKACAP17612 351 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 CAV2P51636 162 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 OR2T2Q6IF00 324 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 FAM122CQ6P4D5 195 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 C2CD4CQ8TF44 421 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 UBE2J1Q9Y385 318 aaPredicted RBP12.74□□□□□ -0.37
UBA1-201ENST00000335972 CA11O75493 328 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 CST4P01036 141 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 PRH1P02810 166 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 PMP22Q01453 160 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 STK11Q15831 433 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 UQCC3Q6UW78 93 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 ASCL4Q6XD76 172 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 C20orf204Q6ZNR8 217 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 TUBD1Q9UJT1 453 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 SPTBN2O15020 2390 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 GNRHRP30968 328 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.74□□□□□ -0.37
UBA1-201ENST00000335972 TBC1D26Q86UD7 250 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 GAPTQ8N292 157 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 IL1F10Q8WWZ1 152 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 APH1AQ96BI3 265 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 MOB3AQ96BX8 217 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 CCL28Q9NRJ3 127 aa12.74□□□□□ -0.37
UBA1-201ENST00000335972 RHBDL1O75783 438 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 WISP2O76076 250 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 DAOP14920 347 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 CTRB1P17538 263 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 PVALBP20472 110 aaPredicted RBP12.73□□□□□ -0.37
UBA1-201ENST00000335972 CXorf66Q5JRM2 361 aaPredicted RBP12.73□□□□□ -0.37
UBA1-201ENST00000335972 CTRB2Q6GPI1 263 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 ZNF818PQ6ZRF7 136 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 MCEMP1Q8IX19 187 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 PURGQ9UJV8 347 aaKnown RBP12.73□□□□□ -0.37
UBA1-201ENST00000335972 EPHA1P21709 976 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 CA6P23280 308 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 AKR1D1P51857 326 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 EIF3IQ13347 325 aaKnown RBP12.73□□□□□ -0.37
UBA1-201ENST00000335972 HERPUD1Q15011 391 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 MIDNQ504T8 468 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 TMEM217Q8N7C4 229 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 SMIM8Q96KF7 97 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 REPIN1Q9BWE0 567 aaKnown RBP12.73□□□□□ -0.37
UBA1-201ENST00000335972 SSSCA1O60232 199 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 MEOX1P50221 254 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 ZDHHC23Q8IYP9 409 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 ABHD14AQ9BUJ0 271 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 B4GALT7Q9UBV7 327 aa12.73□□□□□ -0.37
UBA1-201ENST00000335972 ICE1Q9Y2F5 2266 aa12.72□□□□□ -0.37
UBA1-201ENST00000335972 C3orf85A0A1B0GTC6 90 aa12.72□□□□□ -0.37
UBA1-201ENST00000335972 MPPED1O15442 326 aa12.72□□□□□ -0.37
UBA1-201ENST00000335972 TMEM182Q6ZP80 229 aaPredicted RBP12.72□□□□□ -0.37
UBA1-201ENST00000335972 LGI3Q8N145 548 aa12.72□□□□□ -0.37
UBA1-201ENST00000335972 C18orf12Q96KH6 178 aa12.72□□□□□ -0.37
UBA1-201ENST00000335972 USB1Q9BQ65 265 aaKnown RBP12.72□□□□□ -0.37
UBA1-201ENST00000335972 RGCCQ9H4X1 137 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms